Evidence map›Paper›PMID 27668515›Full record

ArticleeLife2016

Protein sequences bound to mineral surfaces persist into deep time.

Beatrice Demarchi, Shaun Hall, Teresa Roncal-Herrero, Colin L Freeman, Jos Woolley, Molly K Crisp, Julie Wilson, Anna Fotakis, Roman Fischer, Benedikt M Kessler and 26 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 98 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
98citing papers in PubMed, 1 pooled it
55.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

98 citing papers in PubMed, 1 synthesis or guideline pooled it, 270 citations in OpenAlex.

  1. Pooled it
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  18. Paleoproteomics sheds light on million-year-old fossils.Nature reviews. Molecular cell biology · 2025
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38 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

36 authors at 11 institutions in 7 countries.

Beatrice DemarchiBioArCh, Department of Archaeology, University of York, York, United Kingdom.ORCID http://orcid.org/0000-0002-8398-4409
Shaun HallDepartment of Material Science and Engineering, University of Sheffield, Sheffield, United Kingdom.
Teresa Roncal-HerreroDepartment of Physics, University of York, York, United Kingdom.
Colin L FreemanDepartment of Material Science and Engineering, University of Sheffield, Sheffield, United Kingdom.
Jos WoolleyBioArCh, Department of Archaeology, University of York, York, United Kingdom.
Molly K CrispDepartment of Chemistry, University of York, York, United Kingdom.
Julie WilsonDepartment of Chemistry, University of York, York, United Kingdom.
Anna FotakisCentre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, Copenhagen, Denmark.
Roman FischerAdvanced Proteomics Facility, Target Discovery Institute, Nuffield Department of Medicine, University of Oxford, Oxford, United Kingdom.
Benedikt M KesslerAdvanced Proteomics Facility, Target Discovery Institute, Nuffield Department of Medicine, University of Oxford, Oxford, United Kingdom.
Rosa Rakownikow Jersie-ChristensenNovo Nordisk Foundation Center for Protein Research, Faculty of Health Sciences, University of Copenhagen, Copenhagen, Denmark.
Jesper V OlsenNovo Nordisk Foundation Center for Protein Research, Faculty of Health Sciences, University of Copenhagen, Copenhagen, Denmark.
James HaileResearch Laboratory for Archaeology and the History of Art, University of Oxford, Oxford, United Kingdom.
Jessica ThomasCentre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, Copenhagen, Denmark.
Curtis W MareanInstitute of Human Origins, SHESC, Arizona State University, Tempe, United States.
John ParkingtonDepartment of Archaeology, University of Cape Town, Cape Town, South Africa.
Samantha PressleeBioArCh, Department of Archaeology, University of York, York, United Kingdom.
Julia Lee-ThorpResearch Laboratory for Archaeology and the History of Art, University of Oxford, Oxford, United Kingdom.
Peter DitchfieldResearch Laboratory for Archaeology and the History of Art, University of Oxford, Oxford, United Kingdom.
Jacqueline F HamiltonWolfson Atmospheric Chemistry Laboratories, Department of Chemistry, University of York, York, United Kingdom.
Martyn W WardWolfson Atmospheric Chemistry Laboratories, Department of Chemistry, University of York, York, United Kingdom.
Chunting Michelle WangWolfson Atmospheric Chemistry Laboratories, Department of Chemistry, University of York, York, United Kingdom.
Marvin D ShawWolfson Atmospheric Chemistry Laboratories, Department of Chemistry, University of York, York, United Kingdom.
Terry HarrisonCenter for the Study of Human Origins, Department of Anthropology, New York University, New York, United States.
Manuel Domínguez-RodrigoDepartment of Prehistory, Complutense University of Madrid, Madrid, Spain.
Ross DE MacPheeDepartment of Mammalogy, American Museum of Natural History, New York, United States.
Amandus KwekasonNational Museum of Tanzania, Dar es Salaam, Tanzania.
Michaela EckerResearch Laboratory for Archaeology and the History of Art, University of Oxford, Oxford, United Kingdom.ORCID http://orcid.org/0000-0001-9581-1882
Liora Kolska HorwitzNational Natural History Collections, Faculty of Life Sciences, The Hebrew University, Jerusalem, Israel.
Michael ChazanDepartment of Anthropology, University of Toronto, Toronto, Canada.
Roland KrögerDepartment of Physics, University of York, York, United Kingdom.
Jane Thomas-OatesDepartment of Chemistry, University of York, York, United Kingdom.
John H HardingDepartment of Material Science and Engineering, University of Sheffield, Sheffield, United Kingdom.
Enrico CappelliniCentre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, Copenhagen, Denmark.
Kirsty PenkmanDepartment of Chemistry, University of York, York, United Kingdom.
Matthew J CollinsBioArCh, Department of Archaeology, University of York, York, United Kingdom.
University of York · GBUniversity of Oxford · GBUniversity of Copenhagen · DKUniversity of Sheffield · GBAmerican Museum of Natural History · USArizona State University · USNational Library of Israel · ILNew York University · USUniversidad Complutense de Madrid · ESUniversity of Cape Town · ZAUniversity of Toronto · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Proteins persist longer in the fossil record than DNA, but the longevity, survival mechanisms and substrates remain contested. Here, we demonstrate the role of mineral binding in preserving the protein sequence in ostrich (Struthionidae) eggshell, including from the palaeontological sites of Laetoli (3.8 Ma) and Olduvai Gorge (1.3 Ma) in Tanzania. By tracking protein diagenesis back in time we find consistent patterns of preservation, demonstrating authenticity of the surviving sequences. Molecular dynamics simulations of struthiocalcin-1 and -2, the dominant proteins within the eggshell, reveal that distinct domains bind to the mineral surface. It is the domain with the strongest calculated binding energy to the calcite surface that is selectively preserved. Thermal age calculations demonstrate that the Laetoli and Olduvai peptides are 50 times older than any previously authenticated sequence (equivalent to ~16 Ma at a constant 10°C).

Indexed as

biochemistrybiomineralizationeggshellevolutionary biologygenomicsmolecular dynamicspaleontologypaleoproteomicsStruthio camelus

Identifiers

PMID27668515
PMCPMC5039028
OpenAlexW2524133771

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.