Evidence map›Paper›PMID 27668183›Full record

ArticleGenomics data2016

Draft genome sequence of the extremely halophilic Halorubrum sp. SAH-A6 isolated from rock salts of the Danakil depression, Ethiopia.

Ashagrie Gibtan, Mingyeong Woo, Dokyung Oh, Kyounghee Park, Han-Seung Lee, Jae Hak Sohn, Dong-Woo Lee, Jung-Kue Shin, Sang-Jae Lee

Abstract read
In one paragraph

Article in Genomics data, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Ashagrie GibtanMajor in Food Biotechnology and The Research Center for Extremophiles & Marine Microbiology, Silla University, Busan 46958, Republic of Korea.
Mingyeong WooMajor in Food Biotechnology and The Research Center for Extremophiles & Marine Microbiology, Silla University, Busan 46958, Republic of Korea.
Dokyung OhMajor in Food Biotechnology and The Research Center for Extremophiles & Marine Microbiology, Silla University, Busan 46958, Republic of Korea.
Kyounghee ParkMajor in Food Biotechnology and The Research Center for Extremophiles & Marine Microbiology, Silla University, Busan 46958, Republic of Korea.
Han-Seung LeeMajor in Food Biotechnology and The Research Center for Extremophiles & Marine Microbiology, Silla University, Busan 46958, Republic of Korea.
Jae Hak SohnMajor in Food Biotechnology and The Research Center for Extremophiles & Marine Microbiology, Silla University, Busan 46958, Republic of Korea.
Dong-Woo LeeSchool of Applied Bioscience, Kyungpook National University, Daegu 41566, Republic of Korea.
Jung-Kue ShinDepartment of Korean Cuisine and Food Industry Research Institute, Jeonju University, Jeonju 55069, Republic of Korea.
Sang-Jae LeeMajor in Food Biotechnology and The Research Center for Extremophiles & Marine Microbiology, Silla University, Busan 46958, Republic of Korea.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The draft genome sequence of Halorubrum sp. SAH-A6, isolated from commercial rock salts of the Danakil depression, Ethiopia. The genome comprised 3,325,770 bp, with the G + C content of 68.0%. The strain has many genes which are responsible for secondary metabolites biosynthesis, transport and catabolism as compared to other Halorubrum archaea members. Abundant genes responsible for numerous transport systems, solute accumulation, and aromatic/sulfur decomposition were detected. The first genomic analysis encourages further research on comparative genomics, and biotechnological applications. The NCBI accession number for this genome is SAMN04278861 and ID: 4278861 and strain deposited with accession number KCTC 43215.

Indexed as

Danakil depressionEthiopiaGenomeHalorubrum sp. SAH-A6Rock salts

Identifiers

PMID27668183
PMCPMC5024332

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.