Evidence map›Paper›PMID 27666481›Full record

ArticleBiochemical and biophysical research communications2016

Phosphatidylinositol (3,4,5)-trisphosphate binds to sortilin and competes with neurotensin: Implications for very low density lipoprotein binding.

Robert P Sparks, Jermaine L Jenkins, Gregory E Miner, Yan Wang, Wayne C Guida, Charles E Sparks, Rutilio A Fratti, Janet D Sparks

Abstract read
In one paragraph

Article in Biochemical and biophysical research communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Anti-sortilin1 Antibody Up-Regulates ProgranulinFrontiers in neuroscience · 2020
    Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Robert P SparksDepartment of Biochemistry, University of Illinois Urbana-Champaign, Urbana, IL 61801, USA.
Jermaine L JenkinsDepartment of Biochemistry and Biophysics, University of Rochester Medical Center, Rochester, NY 14642, USA.
Gregory E MinerDepartment of Biochemistry, University of Illinois Urbana-Champaign, Urbana, IL 61801, USA.
Yan WangDepartment of Biochemistry, University of Illinois Urbana-Champaign, Urbana, IL 61801, USA.
Wayne C GuidaDepartment of Chemistry, University of South Florida, Tampa, FL 33520, USA.
Charles E SparksDepartment of Pathology and Laboratory Medicine, University of Rochester Medical Center, Rochester, NY 14642, USA.
Rutilio A FrattiDepartment of Biochemistry, University of Illinois Urbana-Champaign, Urbana, IL 61801, USA.
Janet D SparksDepartment of Pathology and Laboratory Medicine, University of Rochester Medical Center, Rochester, NY 14642, USA. Electronic address: Janet_Sparks@urmc.rochester.edu.
University of Illinois Urbana-Champaign · USUniversity of Rochester Medical Center · USUniversity of South Florida · US

Funding

Allosteric Regulation of SNAREs and the Rab GEF Mon1 by PhosphoinositidesR01GM101132 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI FRATTI, RUTILIO A · 2012 to 2016
$1.4M
Postprandial insulin regulation of B100 and importance to VLDL1 secretionR01DK100163 · NIDDK · UNIVERSITY OF ROCHESTER · PI SPARKS, JANET DEHOFF · 2014 to 2015
$614k
NIDDK NIH HHS R01 DK100163NIGMS NIH HHS R01 GM101132
6 · The paper itself

Abstract

Sortilin is a multi-ligand sorting receptor that interacts with B100-containing VLDL and LDL as well as other ligands including neurotensin (NT). The current study investigates the hypothesis that phosphatidylinositol (3,4,5)-trisphosphate (PIP3) generated downstream of insulin action can directly bind to sortilin. NT binds to sortilin at a well characterized site via its carboxy terminus (C-term). Using a crystal structure of human sortilin (hsortilin), PIP3 is predicted to bind at this C-term site. Binding of PIP3 to hsortilin is demonstrated using surface plasmon resonance (SPR) flowing PIP3 nanodiscs over immobilized hsortilin. Studies were performed using SPR where dibutanoyl PIP3 is shown to compete with NT for sortilin binding. Rat VLDL and LDL were evaluated for PIP3 content immunologically using monoclonal antibodies directed against PIP3. Rat plasma VLDL contained three times more immunoreactive PIP3 than LDL per μg of protein. Because VLDL contains additional ligands that bind sortilin, to distinguish specific PIP3 binding, we used PIP3 liposomes. Liposome floatation assays were used to demonstrate PIP3 liposome binding to sortilin. Using SPR and immobilized hsortilin, the C-term NT tetrapeptide (P-Y-I-L) is shown to bind to hsortilin. A compound (cpd984) was identified with strong theoretical binding to the site on sortilin involved in NT N-terminal binding. When cpd984 is co-incubated with the tetrapeptide, the affinity of binding to sortilin is increased. Similarly, the affinity of PIP3 liposome binding increased in the presence of cpd984. Overall, results demonstrate that sortilin is a PIP3 binding protein with binding likely to occur at the C-term NT binding site. The presence of multiple ligands on B100-containing lipoproteins, VLDL and LDL, raises the interesting possibility for increased interaction with sortilin based on the presence of PIP3.

Indexed as

Adaptor Proteins, Vesicular TransportAnimalsBinding SitesComputer SimulationHumansLipoproteins, VLDLLiposomesNeurotensinPhosphatidylinositol PhosphatesPhosphatidylinositolsProtein BindingProtein DomainsRatsRats, Sprague-DawleySortilinSurface Plasmon ResonanceAdaptor Proteins, Vesicular TransportLipoproteins, VLDLLiposomesNeurotensinphosphatidylinositol 3,4,5-triphosphatePhosphatidylinositol PhosphatesPhosphatidylinositolsSortilinNeurotensinSortilinSurface plasmon resonanceVLDL-B100

Identifiers

PMID27666481
PMCPMC5056161
OpenAlexW2521512611

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.