Evidence map›Paper›PMID 27664499›Full record

ArticleBiochimica et biophysica acta2016

Stability of an amphipathic helix-hairpin surfactant peptide in liposomes.

Alan J Waring, Monik Gupta, Larry M Gordon, Gary Fujii, Frans J Walther

Open access · greenAbstract read
In one paragraph

Article in Biochimica et biophysica acta, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.2field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Generation of High Concentrations of Respirable Solid-Phase Aerosols from Viscous Fluids.Aerosol science and technology : the journal of the American Association for Aerosol Research · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Alan J WaringDepartment of Medicine, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA, United States; Los Angeles Biomedical Research Institute at Harbor-UCLA Medical Center, Torrance, CA, United States. Electronic address: awaring@labiomed.org.
Monik GuptaLos Angeles Biomedical Research Institute at Harbor-UCLA Medical Center, Torrance, CA, United States.
Larry M GordonLos Angeles Biomedical Research Institute at Harbor-UCLA Medical Center, Torrance, CA, United States.
Gary FujiiMolecular Express Inc., Rancho Dominguez, CA, United States.
Frans J WaltherLos Angeles Biomedical Research Institute at Harbor-UCLA Medical Center, Torrance, CA, United States; Department of Pediatrics, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA, United States.
The Lundquist Institute · USUniversity of California, Los Angeles · US

Funding

Synthetic Lung Surfactant Optimized for Biomedical ApplicationR01HL092158 · NHLBI · LUNDQUIST INSTITUTE FOR BIOMEDICAL INNOVATION AT HARBOR-UCLA MEDICAL CENTER · PI WALTHER, FRANCISKUS JOHANNES · 2008 to 2011
$1.3M
NHLBI NIH HHS R01 HL092158
6 · The paper itself

Abstract

Surfactant protein B (SP-B; 79 residues) is a member of the saposin superfamily and plays a pivotal role in lung function. The N- and C-terminal regions of SP-B, cross-linked by two disulfides, were theoretically predicted to fold as charged amphipathic helices, suggesting participation in surfactant activities. Previous studies with oxidized Super Mini-B (SMB), a construct based on the N- and C-regions of SP-B (i.e., residues 1-25 and 63-78) joined with a designer turn (-PKGG-) and two disulfides, indicated that freshly prepared SMB in lipids folded as a surface active, α-helix-hairpin. Because other peptides modeled on α-helical SP domains lost helicity and surfactant activity on storage, experiments were here performed on oxidized SMB in surfactant liposomes stored at ~2-8°C for ≤5.5years. Captive bubble surfactometry confirmed low minimum surface tensions for fresh and stored SMB preparations. FTIR spectroscopy of fresh and stored SMB formulations showed secondary structures compatible with the peptide folding as α-helix-hairpin. A homology (I-TASSER) model of oxidized SMB demonstrated a globular protein, exhibiting a core of hydrophobic residues and a surface of polar residues. Since mass spectroscopy indicated that the disulfides were maintained on storage, the stability of SMB may be partly due to the disulfides bringing the N- and C-α-helices closer. Mass spectroscopy of stored SMB preparations showed some methionine oxidation, and also partial deacylation of surfactant phospholipids to form lyso-derivatives. However, the stable conformation and activity of stored SMB surfactant suggest that the active helix-hairpin resists these chemical changes which otherwise may lead to surfactant inhibition.

Indexed as

DisulfidesLipidsLiposomesMolecular WeightProtein StabilityProtein Structure, SecondaryPulmonary Surfactant-Associated Protein BSpectroscopy, Fourier Transform InfraredDisulfidesLipidsLiposomesPulmonary Surfactant-Associated Protein BCaptive bubble surfactometryFTIR spectroscopyHomology modelingLyso-phospholipidsSuper Mini-B (SMB)Surfactant lipidsSurfactant protein B (SP-B)

Identifiers

PMID27664499
PMCPMC5096961
OpenAlexW2521731765

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.