Evidence map›Paper›PMID 27664178›Full record

ArticleGenome biology and evolution2016

Loss of a Trans-Splicing nad1 Intron from Geraniaceae and Transfer of the Maturase Gene matR to the Nucleus in Pelargonium.

Felix Grewe, Andan Zhu, Jeffrey P Mower

Open access · goldAbstract readLetter
In one paragraph

Article in Genome biology and evolution, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Article
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  4. Complete Plastid and Mitochondrial Genomes ofInternational journal of molecular sciences · 2021
    Article
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  6. Article
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  9. Article
  10. Cytonuclear integration and co-evolution.Nature reviews. Genetics · 2018
    Review
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Felix GreweCenter for Plant Science Innovation, University of Nebraska, Lincoln, Nebraska.
Andan ZhuCenter for Plant Science Innovation, University of Nebraska, Lincoln, Nebraska.
Jeffrey P MowerCenter for Plant Science Innovation, University of Nebraska, Lincoln, Nebraska jpmower@unl.edu.
University of Nebraska–Lincoln · USField Museum of Natural History · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The mitochondrial nad1 gene of seed plants has a complex structure, including four introns in cis or trans configurations and a maturase gene (matR) hosted within the final intron. In the geranium family (Geraniaceae), however, sequencing of representative species revealed that three of the four introns, including one in a trans configuration and another that hosts matR, were lost from the nad1 gene in their common ancestor. Despite the loss of the host intron, matR has been retained as a freestanding gene in most genera of the family, indicating that this maturase has additional functions beyond the splicing of its host intron. In the common ancestor of Pelargonium, matR was transferred to the nuclear genome, where it was split into two unlinked genes that encode either its reverse transcriptase or maturase domain. Both nuclear genes are transcribed and contain predicted mitochondrial targeting signals, suggesting that they express functional proteins that are imported into mitochondria. The nuclear localization and split domain structure of matR in the Pelargonium nuclear genome offers a unique opportunity to assess the function of these two domains using transgenic approaches.

Indexed as

Evolution, MolecularGene Transfer, HorizontalCell NucleusEndoribonucleasesIntronsNADH DehydrogenaseNucleotidyltransferasesPelargoniumPlant ProteinsSequence DeletionTrans-SplicingEndoribonucleasesmRNA maturaseNADH DehydrogenaseNucleotidyltransferasesPlant ProteinsGeraniaceaeintron splicingmatR maturasenad1 generetroprocessing

Identifiers

PMID27664178
PMCPMC5174742
OpenAlexW2521603520

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.