Evidence map›Paper›PMID 27661980›Full record

ArticlePloS one

The D519G Polymorphism of Glyceronephosphate O-Acyltransferase Is a Risk Factor for Familial Porphyria Cutanea Tarda.

Colin P Farrell, Jessica R Overbey, Hetanshi Naik, Danielle Nance, Gordon D McLaren, Christine E McLaren, Luming Zhou, Robert J Desnick, Charles J Parker, John D Phillips

Open access · goldAbstract read
In one paragraph

Article in PloS one. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.7field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Heme biosynthesis and the porphyrias.Molecular genetics and metabolism · 2019
    Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Colin P FarrellDepartment of Medicine, Hematology Division, University of Utah School of Medicine, Salt Lake City, Utah, United States of America.
Jessica R OverbeyPopulation Health Science and Policy, Mt. Sinai School of Medicine, New York City, New York, United States of America.
Hetanshi NaikGenetics and Genomics Sciences, Mt. Sinai School of Medicine, New York City, New York, United States of America.
Danielle NanceDepartment of Medicine, Hematology Division, University of Utah School of Medicine, Salt Lake City, Utah, United States of America.
Gordon D McLarenVeterans Affairs, Long Beach Healthcare System, Long Beach, California, United States of America.
Christine E McLarenEpidemiology, University of California Irvine, Irvine, California, United States of America.
Luming ZhouPathology, University of Utah School of Medicine, Salt Lake City, Utah, United States of America.
Robert J DesnickGenetics and Genomics Sciences, Mt. Sinai School of Medicine, New York City, New York, United States of America.
Charles J ParkerDepartment of Medicine, Hematology Division, University of Utah School of Medicine, Salt Lake City, Utah, United States of America.
John D PhillipsDepartment of Medicine, Hematology Division, University of Utah School of Medicine, Salt Lake City, Utah, United States of America.ORCID http://orcid.org/0000-0003-1567-1678
University of Utah · USIcahn School of Medicine at Mount Sinai · USUniversity of California, Irvine · US

Funding

Univ.of Calif., Irvine Cancer Center Support GrantP30CA062203 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI Christine Hui · 1994 to 2026
$57.9M
University of Utah Center for Clinical and Translational ScienceUL1TR001067 · NCATS · UNIVERSITY OF UTAH · PI DERE, WILLARD H., HESS, RACHEL · 2013 to 2017
$19.8M
Porphyrias Consortium: SupplementU54DK083909 · NIDDK · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI DESNICK, ROBERT J · 2009 to 2023
$18.5M
Proteomics CoreU54DK110858 · NIDDK · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI Anna E Beaudin, JAMES Eric COX · 2016 to 2026
$8.6M
PORPHYRIN BIOSYNTHESIS IN NORMAL AND DISEASE STATESR01DK020503 · NIDDK · UNIVERSITY OF UTAH · PI PARKER, CHARLES J, PHILLIPS, JOHN DEARBORN · 1986 to 2012
$3.3M
Regulation of Iron HomeostasisR01DK090257 · NIDDK · UNIVERSITY OF UTAH · PI PHILLIPS, JOHN DEARBORN · 2010 to 2014
$1.8M
PORPHYRIN BIOSYNTHESIS IN NORMAL AND DISEASE STATESR37DK020503 · NIDDK · UNIVERSITY OF UTAH · PI KUSHNER, JAMES P · 1993 to 2001
$463k
Genetic Modifiers of Iron Status in Hemochromatosis HFE C282Y HomozygotesR24DK093433 · NIDDK · UNIVERSITY OF CALIFORNIA-IRVINE · PI MCLAREN, CHRISTINE E., MCLAREN, GORDON D · 2011 to 2011
$376k
Porphyrin Biosynthesis in Normal and Disease StatesR56DK020503 · NIDDK · UNIVERSITY OF UTAH · PI PHILLIPS, JOHN DEARBORN · 2013 to 2013
$149k
NCATS NIH HHS UL1 TR001067NCI NIH HHS P30 CA062203NIDDK NIH HHS R01 DK020503NIDDK NIH HHS R01 DK090257NIDDK NIH HHS R24 DK093433NIDDK NIH HHS R37 DK020503NIDDK NIH HHS R56 DK020503NIDDK NIH HHS U54 DK083909NIDDK NIH HHS U54 DK110858
6 · The paper itself

Abstract

Both familial and sporadic porphyria cutanea tarda (PCT) are iron dependent diseases. Symptoms of PCT resolve when iron stores are depleted by phlebotomy, and a sequence variant of HFE (C282Y, c.843G>A, rs1800562) that enhances iron aborption by reducing hepcidin expression is a risk factor for PCT. Recently, a polymorphic variant (D519G, c.1556A>G, rs11558492) of glyceronephosphate O-acyltransferase (GNPAT) was shown to be enriched in male patients with type I hereditary hemochromatosis (HFE C282Y homozygotes) who presented with a high iron phenotype, suggesting that GNPAT D519G, like HFE C282Y, is a modifier of iron homeostasis that favors iron absorption. To challenge this hypothesis, we investigated the frequency of GNPAT D519G in patients with both familial and sporadic PCT. Patients were screened for GNPAT D519G and allelic variants of HFE (both C282Y and H63D). Nucleotide sequencing of uroporphyrinogen decarboxylase (URO-D) identified mutant alleles. Patients with low erythrocyte URO-D activity or a damaging URO-D variant were classified as familial PCT (fPCT) and those with wild-type URO-D were classified as sporadic PCT (sPCT). GNPAT D519G was significantly enriched in the fPCT patient population (p = 0.0014) but not in the sPCT population (p = 0.4477). Both HFE C282Y and H63D (c.187C>G, rs1799945) were enriched in both PCT patient populations (p<0.0001) but showed no greater association with fPCT than with sPCT.

conclusionGNPAT D519G is a risk factor for fPCT, but not for sPCT.

Identifiers

PMID27661980
PMCPMC5035022
OpenAlexW2523309056

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.