ArticleFrontiers in plant science2016
Genome-Wide SNP Linkage Mapping and QTL Analysis for Fiber Quality and Yield Traits in the Upland Cotton Recombinant Inbred Lines Population.
Article in Frontiers in plant science, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.
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Who cites it
46 citing papers in PubMed.
- Genetic and biochemical analyses identify a major locus, GH-PA1, underlying pollen carotenoid accumulation and pigmentation in upland cotton.Journal of experimental botany · 2025Article
- Identification of Stable Meta-QTLs and Candidate Genes Underlying Fiber Quality and Agronomic Traits in Cotton.Plants (Basel, Switzerland) · 2025Article
- Molecular dissection of quantitative variation in fiber elongation betweenFrontiers in plant science · 2025Article
- Unravelling the genetic basis and regulation networks related to fibre quality improvement using chromosome segment substitution lines in cotton.Plant biotechnology journal · 2024Article
- Association mapping and candidate gene identification for yield traits in European hazelnut (Plant direct · 2024Article
- Quantitative Trait Locus Mapping for Plant Height and Branch Number in CCRI70 Recombinant Inbred Line Population of Upland Cotton (Gossypium hirsutum).Plants (Basel, Switzerland) · 2024Article
- Genome-wide artificial introgressions of Gossypium barbadense into G. hirsutum reveal superior loci for simultaneous improvement of cotton fiber quality and yield traits.Journal of advanced research · 2023Article
- Quantitative trait loci and candidate genes for yield-related traits of upland cotton revealed by genome-wide association analysis under drought conditions.BMC genomics · 2023Article
- Lint percentage and boll weight QTLs in three excellent upland cotton (Gossypium hirsutum): ZR014121, CCRI60, and EZ60.BMC plant biology · 2023Article
- Estimating the combining ability and genetic parameters for growth habit, yield, and fiber quality traits in some Egyptian cotton crosses.BMC plant biology · 2023Article
- Genome wide study of cysteine rich receptor like proteins in Gossypium sp.Scientific reports · 2022Article
- Development and evaluation of India's first intraspecificJournal of genetics · 2022Article
- Genome resequencing-based high-density genetic map and QTL detection for yield and fiber quality traits in diploid Asiatic cotton (Gossypium arboreum).Molecular genetics and genomics : MGG · 2022Article
- Detection of Stable Elite Haplotypes and Potential Candidate Genes of Boll Weight Across Multiple Environments via GWAS in Upland Cotton.Frontiers in plant science · 2022Article
- Identification of Stable and Multiple Environment Interaction QTLs and Candidate Genes for Fiber Productive Traits Under Irrigated and Water Stress Conditions Using Intraspecific RILs ofFrontiers in plant science · 2022Article
- Inheritance, QTLs, and Candidate Genes of Lint Percentage in Upland Cotton.Frontiers in genetics · 2022Review
- Quantitative Trait Locus Mapping and Identification of Candidate Genes for Resistance to Fusarium Wilt Race 7 Using a Resequencing-Based High Density Genetic Bin Map in a Recombinant Inbred Line Population ofFrontiers in plant science · 2022Article
- GBS-SNP and SSR based genetic mapping and QTL analysis for drought tolerance in upland cotton.Physiology and molecular biology of plants : an international journal of functional plant biology · 2021Article
- Quantitative Trait Locus Analysis and Identification of Candidate Genes for Micronaire in an Interspecific Backcross Inbred Line Population ofFrontiers in plant science · 2021Article
- The Pivotal Role of Major Chromosomes of Sub-Genomes A and D in Fiber Quality Traits of Cotton.Frontiers in genetics · 2021Review
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11 authors.
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Abstract
It is of significance to discover genes related to fiber quality and yield traits and tightly linked markers for marker-assisted selection (MAS) in cotton breeding. In this study, 188 F8 recombinant inbred lines (RILs), derived from a intraspecific cross between HS46 and MARCABUCAG8US-1-88 were genotyped by the cotton 63K single nucleotide polymorphism (SNP) assay. Field trials were conducted in Sanya, Hainan Province, during the 2014-2015 cropping seasons under standard conditions. Results revealed significant differences (P < 0.05) among RILs, environments and replications for fiber quality and yield traits. Broad-sense heritabilities of all traits including fiber length, fiber uniformity, micronaire, fiber elongation, fiber strength, boll weight, and lint percentage ranged from 0.26 to 0.66. A 1784.28 cM (centimorgans) linkage map, harboring 2618 polymorphic SNP markers, was constructed, which had 0.68 cM per marker density. Seventy-one quantitative trait locus (QTLs) for fiber quality and yield traits were detected on 21 chromosomes, explaining 4.70∼32.28% phenotypic variance, in which 16 were identified as stable QTLs across two environments. Meanwhile, 12 certain regions were investigated to be involved in the control of one (hotspot) or more (cluster) traits, mainly focused on Chr05, Chr09, Chr10, Chr14, Chr19, and Chr20. Nineteen pairs of epistatic QTLs (e-QTLs) were identified, of which two pairs involved in two additive QTLs. These additive QTLs, e-QTLs, and QTL clusters were tightly linked to SNP markers, which may serve as target regions for map-based cloning, gene discovery, and MAS in cotton breeding.
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