ArticleFrontiers in microbiology2016
The Willow Microbiome Is Influenced by Soil Petroleum-Hydrocarbon Concentration with Plant Compartment-Specific Effects.
Article in Frontiers in microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
29 citing papers in PubMed.
- Distinct Yet Coordinated: Pattern of Leaf and Root Fungal Endophyte Communities in an Alpine Meadow.Journal of fungi (Basel, Switzerland) · 2026Article
- Potential mode of action of multispecies inoculums on wheat growth under water stress.ISME communications · 2025Article
- Article
- Soil fauna-microbial interactions shifts fungal and bacterial communities under a contamination disturbance.PloS one · 2023Article
- Field scale biodegradation of total petroleum hydrocarbons and soil restoration by Ecopiles: microbiological analysis of the process.Frontiers in microbiology · 2023Article
- Plant Microbiome Engineering: Hopes or Hypes.Biology · 2022Review
- Response of Poplar and Associated Fungal Endophytic Communities to a PAH Contamination Gradient.International journal of molecular sciences · 2022Article
- Differences between the effects of plant species and compartments on microbiome composition in two halophyteBioengineered · 2022Article
- Unexpected diversity among small-scale sample replicates of defined plant root compartments.The ISME journal · 2022Article
- Changes of Endophytic Bacterial Community in Mature Leaves ofPlants (Basel, Switzerland) · 2022Article
- Ectomycorrhizal Fungi Dominated the Root and Rhizosphere Microbial Communities of Two Willow Cultivars Grown for Six-Years in a Mixed-Contaminated Environment.Journal of fungi (Basel, Switzerland) · 2022Article
- Silicon fertilizer mediated structural variation and niche differentiation in the rhizosphere and endosphere bacterial microbiome and metabolites of sugarcane.Frontiers in microbiology · 2022Article
- Mixed growth of Salix species can promote phosphate-solubilizing bacteria in the roots and rhizosphere.Frontiers in microbiology · 2022Article
- The Effect of Syringic Acid and Phenoxy Herbicide 4-chloro-2-methylphenoxyacetic acid (MCPA) on Soil, Rhizosphere, and Plant Endosphere Microbiome.Frontiers in plant science · 2022Article
- Biotransformation ability of endophytic fungi: from species evolution to industrial applications.Applied microbiology and biotechnology · 2021Review
- Soil Characteristics Constrain the Response of Microbial Communities and Associated Hydrocarbon Degradation Genes during Phytoremediation.Applied and environmental microbiology · 2021Article
- Niches and Seasonal Changes, Rather Than Transgenic Events, Affect the Microbial Community ofFrontiers in microbiology · 2021Article
- Role of environmental factors in shaping the soil microbiome.Environmental science and pollution research international · 2020Review
- The effect of plant compartments on the Broussonetia papyrifera-associated fungal and bacterial communities.Applied microbiology and biotechnology · 2020Article
- Stable isotope probing and metagenomics highlight the effect of plants on uncultured phenanthrene-degrading bacterial consortium in polluted soil.The ISME journal · 2019Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
6 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The interaction between plants and microorganisms, which is the driving force behind the decontamination of petroleum hydrocarbon (PHC) contamination in phytoremediation technology, is poorly understood. Here, we aimed at characterizing the variations between plant compartments in the microbiome of two willow cultivars growing in contaminated soils. A field experiment was set-up at a former petrochemical plant in Canada and after two growing seasons, bulk soil, rhizosphere soil, roots, and stems samples of two willow cultivars (Salix purpurea cv. FishCreek, and Salix miyabeana cv. SX67) growing at three PHC contamination concentrations were taken. DNA was extracted and bacterial 16S rRNA gene and fungal internal transcribed spacer (ITS) regions were amplified and sequenced using an Ion Torrent Personal Genome Machine (PGM). Following multivariate statistical analyses, the level of PHC-contamination appeared as the primary factor influencing the willow microbiome with compartment-specific effects, with significant differences between the responses of bacterial, and fungal communities. Increasing PHC contamination levels resulted in shifts in the microbiome composition, favoring putative hydrocarbon degraders, and microorganisms previously reported as associated with plant health. These shifts were less drastic in the rhizosphere, root, and stem tissues as compared to bulk soil, probably because the willows provided a more controlled environment, and thus, protected microbial communities against increasing contamination levels. Insights from this study will help to devise optimal plant microbiomes for increasing the efficiency of phytoremediation technology.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.