Evidence map›Paper›PMID 27660165›Full record

ArticlePlant physiology2016

Identification of Homogentisate Dioxygenase as a Target for Vitamin E Biofortification in Oilseeds.

Minviluz G Stacey, Rebecca E Cahoon, Hanh T Nguyen, Yaya Cui, Shirley Sato, Cuong T Nguyen, Nongnat Phoka, Kerry M Clark, Yan Liang, Joe Forrester and 6 more

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 59 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Gene Localization and Functional Validation ofPlants (Basel, Switzerland) · 2025
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  6. Review
  7. Article
  8. Article
  9. HarnessingAntioxidants (Basel, Switzerland) · 2024
    Article
  10. Overexpression of the potatoFrontiers in plant science · 2024
    Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Vitamin E synthesis and response in plants.Frontiers in plant science · 2022
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 2 institutions in 1 country.

Minviluz G StaceyDivision of Plant Sciences (M.G.S., Y.C., C.T.N., K.M.C., Y.L., J.B., P.T.D., D.A.S., G.S.), Division of Biochemistry (G.S.), and DNA Core Facility (J.F.), University of Missouri, Columbia, Missouri 65211; and staceym@missouri.edu.ORCID 0000-0002-3774-720X
Rebecca E CahoonDivision of Plant Sciences (M.G.S., Y.C., C.T.N., K.M.C., Y.L., J.B., P.T.D., D.A.S., G.S.), Division of Biochemistry (G.S.), and DNA Core Facility (J.F.), University of Missouri, Columbia, Missouri 65211; and.ORCID 0000-0003-3392-5766
Hanh T NguyenDivision of Plant Sciences (M.G.S., Y.C., C.T.N., K.M.C., Y.L., J.B., P.T.D., D.A.S., G.S.), Division of Biochemistry (G.S.), and DNA Core Facility (J.F.), University of Missouri, Columbia, Missouri 65211; and.
Yaya CuiDivision of Plant Sciences (M.G.S., Y.C., C.T.N., K.M.C., Y.L., J.B., P.T.D., D.A.S., G.S.), Division of Biochemistry (G.S.), and DNA Core Facility (J.F.), University of Missouri, Columbia, Missouri 65211; and.
Shirley SatoDivision of Plant Sciences (M.G.S., Y.C., C.T.N., K.M.C., Y.L., J.B., P.T.D., D.A.S., G.S.), Division of Biochemistry (G.S.), and DNA Core Facility (J.F.), University of Missouri, Columbia, Missouri 65211; and.
Cuong T NguyenDivision of Plant Sciences (M.G.S., Y.C., C.T.N., K.M.C., Y.L., J.B., P.T.D., D.A.S., G.S.), Division of Biochemistry (G.S.), and DNA Core Facility (J.F.), University of Missouri, Columbia, Missouri 65211; and.ORCID 0000-0002-8700-9598
Nongnat PhokaDivision of Plant Sciences (M.G.S., Y.C., C.T.N., K.M.C., Y.L., J.B., P.T.D., D.A.S., G.S.), Division of Biochemistry (G.S.), and DNA Core Facility (J.F.), University of Missouri, Columbia, Missouri 65211; and.ORCID 0000-0002-3579-7668
Kerry M ClarkDivision of Plant Sciences (M.G.S., Y.C., C.T.N., K.M.C., Y.L., J.B., P.T.D., D.A.S., G.S.), Division of Biochemistry (G.S.), and DNA Core Facility (J.F.), University of Missouri, Columbia, Missouri 65211; and.
Yan LiangDivision of Plant Sciences (M.G.S., Y.C., C.T.N., K.M.C., Y.L., J.B., P.T.D., D.A.S., G.S.), Division of Biochemistry (G.S.), and DNA Core Facility (J.F.), University of Missouri, Columbia, Missouri 65211; and.
Joe ForresterDivision of Plant Sciences (M.G.S., Y.C., C.T.N., K.M.C., Y.L., J.B., P.T.D., D.A.S., G.S.), Division of Biochemistry (G.S.), and DNA Core Facility (J.F.), University of Missouri, Columbia, Missouri 65211; and.
Josef BatekDivision of Plant Sciences (M.G.S., Y.C., C.T.N., K.M.C., Y.L., J.B., P.T.D., D.A.S., G.S.), Division of Biochemistry (G.S.), and DNA Core Facility (J.F.), University of Missouri, Columbia, Missouri 65211; and.
Phat Tien DoDivision of Plant Sciences (M.G.S., Y.C., C.T.N., K.M.C., Y.L., J.B., P.T.D., D.A.S., G.S.), Division of Biochemistry (G.S.), and DNA Core Facility (J.F.), University of Missouri, Columbia, Missouri 65211; and.
David A SleperDivision of Plant Sciences (M.G.S., Y.C., C.T.N., K.M.C., Y.L., J.B., P.T.D., D.A.S., G.S.), Division of Biochemistry (G.S.), and DNA Core Facility (J.F.), University of Missouri, Columbia, Missouri 65211; and.
Thomas E ClementeDivision of Plant Sciences (M.G.S., Y.C., C.T.N., K.M.C., Y.L., J.B., P.T.D., D.A.S., G.S.), Division of Biochemistry (G.S.), and DNA Core Facility (J.F.), University of Missouri, Columbia, Missouri 65211; and.ORCID 0000-0003-3650-852X
Edgar B CahoonDivision of Plant Sciences (M.G.S., Y.C., C.T.N., K.M.C., Y.L., J.B., P.T.D., D.A.S., G.S.), Division of Biochemistry (G.S.), and DNA Core Facility (J.F.), University of Missouri, Columbia, Missouri 65211; and.ORCID 0000-0002-7277-1176
Gary StaceyDivision of Plant Sciences (M.G.S., Y.C., C.T.N., K.M.C., Y.L., J.B., P.T.D., D.A.S., G.S.), Division of Biochemistry (G.S.), and DNA Core Facility (J.F.), University of Missouri, Columbia, Missouri 65211; and.ORCID 0000-0001-5914-2247
University of Nebraska–Lincoln · USUniversity of Missouri · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Soybean (Glycine max) is a major plant source of protein and oil and produces important secondary metabolites beneficial for human health. As a tool for gene function discovery and improvement of this important crop, a mutant population was generated using fast neutron irradiation. Visual screening of mutagenized seeds identified a mutant line, designated MO12, which produced brown seeds as opposed to the yellow seeds produced by the unmodified Williams 82 parental cultivar. Using forward genetic methods combined with comparative genome hybridization analysis, we were able to establish that deletion of the GmHGO1 gene is the genetic basis of the brown seeded phenotype exhibited by the MO12 mutant line. GmHGO1 encodes a homogentisate dioxygenase (HGO), which catalyzes the committed enzymatic step in homogentisate catabolism. This report describes to our knowledge the first functional characterization of a plant HGO gene, defects of which are linked to the human genetic disease alkaptonuria. We show that reduced homogentisate catabolism in a soybean HGO mutant is an effective strategy for enhancing the production of lipid-soluble antioxidants such as vitamin E, as well as tolerance to herbicides that target pathways associated with homogentisate metabolism. Furthermore, this work demonstrates the utility of fast neutron mutagenesis in identifying novel genes that contribute to soybean agronomic traits.

Indexed as

Biofortification4-Hydroxyphenylpyruvate DioxygenaseAdaptation, PhysiologicalArabidopsisEnzyme InhibitorsGene DeletionGenome, PlantGlycine maxHerbicidesHomogentisate 1,2-DioxygenaseHomogentisic AcidIsoenzymesMetabolic Networks and PathwaysMutationPhenotypePlant Cells4-Hydroxyphenylpyruvate DioxygenaseEnzyme InhibitorsHerbicidesHomogentisate 1,2-DioxygenaseHomogentisic AcidIsoenzymesPlant OilsVitamin E

Identifiers

PMID27660165
PMCPMC5100773
OpenAlexW2522234602

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.