Evidence map›Paper›PMID 27659694›Full record

ArticleScientific reports2016

Expression of immunoproteasome genes is regulated by cell-intrinsic and -extrinsic factors in human cancers.

Alexandre Rouette, Assya Trofimov, David Haberl, Geneviève Boucher, Vincent-Philippe Lavallée, Giovanni D'Angelo, Josée Hébert, Guy Sauvageau, Sébastien Lemieux, Claude Perreault

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 69 papers.

0numbers the graph read from it
0cells of the map it votes in
69citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

69 citing papers in PubMed, 102 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Review

9 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Alexandre RouetteInstitute for Research in Immunology and Cancer, Montreal, Quebec, Canada.
Assya TrofimovInstitute for Research in Immunology and Cancer, Montreal, Quebec, Canada.
David HaberlInstitute for Research in Immunology and Cancer, Montreal, Quebec, Canada.
Geneviève BoucherInstitute for Research in Immunology and Cancer, Montreal, Quebec, Canada.
Vincent-Philippe LavalléeInstitute for Research in Immunology and Cancer, Montreal, Quebec, Canada.
Giovanni D'AngeloDivision of Hematology-Oncology, Maisonneuve-Rosemont Hospital, Montreal, Quebec, Canada.
Josée HébertInstitute for Research in Immunology and Cancer, Montreal, Quebec, Canada.
Guy SauvageauInstitute for Research in Immunology and Cancer, Montreal, Quebec, Canada.
Sébastien LemieuxInstitute for Research in Immunology and Cancer, Montreal, Quebec, Canada.
Claude PerreaultInstitute for Research in Immunology and Cancer, Montreal, Quebec, Canada.
Hôpital Maisonneuve-Rosemont · CAInstitute for Research in Immunology and Cancer · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Based on transcriptomic analyses of thousands of samples from The Cancer Genome Atlas, we report that expression of constitutive proteasome (CP) genes (PSMB5, PSMB6, PSMB7) and immunoproteasome (IP) genes (PSMB8, PSMB9, PSMB10) is increased in most cancer types. In breast cancer, expression of IP genes was determined by the abundance of tumor infiltrating lymphocytes and high expression of IP genes was associated with longer survival. In contrast, IP upregulation in acute myeloid leukemia (AML) was a cell-intrinsic feature that was not associated with longer survival. Expression of IP genes in AML was IFN-independent, correlated with the methylation status of IP genes, and was particularly high in AML with an M5 phenotype and/or MLL rearrangement. Notably, PSMB8 inhibition led to accumulation of polyubiquitinated proteins and cell death in IP

Identifiers

PMID27659694
PMCPMC5034284
OpenAlexW2522330937

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.