Evidence map›Paper›PMID 27658596›Full record

ArticleThe Korean journal of parasitology2016

Isolation and Genotyping of Acanthamoeba spp. as Neglected Parasites in North of Iran.

Azar Shokri, Shahabeddin Sarvi, Ahmad Daryani, Mehdi Sharif

Open access · diamondAbstract read
In one paragraph

Article in The Korean journal of parasitology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 1 pooled it
3.8field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 synthesis or guideline pooled it, 27 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Isolation and Genotyping of Acanthamoeba from Soil Samples in Markazi Province, Iran.Open access Macedonian journal of medical sciences · 2018
    Article
  9. Article
  10. Article
  11. Article
  12. Free-living amoebae in the water resources of Iran: a systematic review.Journal of parasitic diseases : official organ of the Indian Society for Parasitology · 2017
    Review
  13. Genotyping ofIranian journal of parasitology
    Article
  14. Iranian journal of parasitology
    Article
  15. Article
  16. Isolation and Molecular Identification ofIranian journal of parasitology
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Azar ShokriMolecular and Cell Biology Research Center, Sari Medical School, Mazandaran University of Medical Sciences, Sari, Mazandaran Province, 48175-1683, Iran.
Shahabeddin SarviToxoplasmosis Research Center (TRC), Sari Medical School, Mazandaran University of Medical Sciences, Sari, Mazandaran Province, 48175-1665, Iran.
Ahmad DaryaniToxoplasmosis Research Center (TRC), Sari Medical School, Mazandaran University of Medical Sciences, Sari, Mazandaran Province, 48175-1665, Iran.
Mehdi SharifToxoplasmosis Research Center (TRC), Sari Medical School, Mazandaran University of Medical Sciences, Sari, Mazandaran Province, 48175-1665, Iran.
Mazandaran University of Medical Sciences · IR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Acanthamoeba, a free-living amoeba, is widely distributed in the environment, water sources, soil, dust, and air. It can cause keratitis in contact lens wearers with poor hygiene and also fatal granulomatous amebic encephalitis (GAE) in immunocompromised hosts. The aim of this study was to gain some insights into the distribution and genotypes of the potentially pathogenic species of Acanthamoeba present in water sources in north of Iran. Total 43 Acanthamoeba species were isolated from 77 water samples taken from different water sources within the Mazandaran province in Northern Iran (Sari city and suburbs). Isolates were identified based on cyst and trophozoite morphological characteristics as well genetics. PCR fragments corresponding to the small-subunit 18S rRNA gene were sequenced for 20 of 43 positive isolates. The results revealed that 83.3% of sequenced isolates belonged to the T4 genotype and the rest belonged to the T2 genotype. Our results indicated that Acanthamoeba is widely distributed in Sari city. As the incidence in Iran of amoebic keratitis has increased in recent years, the exact estimation of the prevalence of this amoeba and its predominant genotype may play a crucial role in prevention of the disease. Sari city has several rivers, seashores, and natural recreational amenities, which attract visitors during the year. This is the first report of Acanthamoeba genotypes from water sources in Sari city, Mazandaran province of Iran, and the results suggest that more attention is needed to protect the visiting population and immunocompromised individuals.

Indexed as

GenotypeWater MicrobiologyAcanthamoebaCluster AnalysisDNA, ProtozoanDNA, RibosomalGenotyping TechniquesIranMicroscopyPhylogenyRNA, Ribosomal, 18SSequence Analysis, DNADNA, ProtozoanDNA, RibosomalRNA, Ribosomal, 18SAcanthamoebagenotypingIranparasitic infection

Identifiers

PMID27658596
PMCPMC5040085
OpenAlexW2509661899

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.