Evidence map›Paper›PMID 27656878›Full record

ArticlePloS one

Genome Analysis and Characterisation of the Exopolysaccharide Produced by Bifidobacterium longum subsp. longum 35624™.

Friedrich Altmann, Paul Kosma, Amy O'Callaghan, Sinead Leahy, Francesca Bottacini, Evelyn Molloy, Stephan Plattner, Elisa Schiavi, Marita Gleinser, David Groeger and 12 more

Abstract read
In one paragraph

Article in PloS one. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Trial
  3. Article
  4. Comparative Immunomodulatory Profiles ofJournal of microbiology and biotechnology · 2026
    Article
  5. Review
  6. An 8-Week Course of Bifidobacterium longum 35624Probiotics and antimicrobial proteins · 2025
    Observational
  7. Complementary immunoregulatory effects ofCurrent research in microbial sciences · 2025
    Article
  8. Article
  9. Frontiers in bioengineering and biotechnology · 2024
    Article
  10. Frontiers in microbiology · 2024
    Review
  11. Review
  12. Microorganisms · 2023
    Article
  13. Article
  14. Review
  15. Review
  16. Review
  17. Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors.

Friedrich AltmannUniversity of Natural Resources and Life Sciences, Vienna, Austria.
Paul KosmaUniversity of Natural Resources and Life Sciences, Vienna, Austria.
Amy O'CallaghanAPC Microbiome Institute and School of Microbiology, University College Cork, Cork, Ireland.
Sinead LeahyAPC Microbiome Institute and School of Microbiology, University College Cork, Cork, Ireland.
Francesca BottaciniAPC Microbiome Institute and School of Microbiology, University College Cork, Cork, Ireland.
Evelyn MolloyAPC Microbiome Institute and School of Microbiology, University College Cork, Cork, Ireland.
Stephan PlattnerAlimentary Health, Cork, Ireland.
Elisa SchiaviSwiss Institute of Allergy and Asthma Research (SIAF), University of Zürich, Davos, Switzerland.
Marita GleinserAPC Microbiome Institute and School of Microbiology, University College Cork, Cork, Ireland.
David GroegerAlimentary Health Pharma Davos, Davos, Switzerland.
Ray GrantAlimentary Health Pharma Davos, Davos, Switzerland.
Noelia Rodriguez PerezSwiss Institute of Allergy and Asthma Research (SIAF), University of Zürich, Davos, Switzerland.
Selena HealyAlimentary Health, Cork, Ireland.
Elisabeth SvehlaUniversity of Natural Resources and Life Sciences, Vienna, Austria.
Markus WindwarderUniversity of Natural Resources and Life Sciences, Vienna, Austria.
Andreas HofingerUniversity of Natural Resources and Life Sciences, Vienna, Austria.
Mary O'Connell MotherwayAPC Microbiome Institute and School of Microbiology, University College Cork, Cork, Ireland.
Cezmi A AkdisSwiss Institute of Allergy and Asthma Research (SIAF), University of Zürich, Davos, Switzerland.
Jun XuProcter & Gamble, Cincinnati, United States of America.
Jennifer RoperAlimentary Health, Cork, Ireland.
Douwe van SinderenAPC Microbiome Institute and School of Microbiology, University College Cork, Cork, Ireland.
Liam O'MahonySwiss Institute of Allergy and Asthma Research (SIAF), University of Zürich, Davos, Switzerland.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Bifibobacterium longum subsp. longum 35624™ strain (formerly named Bifidobacterium longum subsp. infantis) is a well described probiotic with clinical efficacy in Irritable Bowel Syndrome clinical trials and induces immunoregulatory effects in mice and in humans. This paper presents (a) the genome sequence of the organism allowing the assignment to its correct subspeciation longum; (b) a comparative genome assessment with other B. longum strains and (c) the molecular structure of the 35624 exopolysaccharide (EPS624). Comparative genome analysis of the 35624 strain with other B. longum strains determined that the sub-speciation of the strain is longum and revealed the presence of a 35624-specific gene cluster, predicted to encode the biosynthetic machinery for EPS624. Following isolation and acid treatment of the EPS, its chemical structure was determined using gas and liquid chromatography for sugar constituent and linkage analysis, electrospray and matrix assisted laser desorption ionization mass spectrometry for sequencing and NMR. The EPS consists of a branched hexasaccharide repeating unit containing two galactose and two glucose moieties, galacturonic acid and the unusual sugar 6-deoxy-L-talose. These data demonstrate that the B. longum 35624 strain has specific genetic features, one of which leads to the generation of a characteristic exopolysaccharide.

Identifiers

PMID27656878
PMCPMC5033381

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.