Evidence map›Paper›PMID 27655688›Full record

ArticleOncotarget2016

Elevated level of acetylation of APE1 in tumor cells modulates DNA damage repair.

Shiladitya Sengupta, Anil K Mantha, Heyu Song, Shrabasti Roychoudhury, Somsubhra Nath, Sutapa Ray, Kishor K Bhakat

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 34 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. The APE1/REF-1 and the hallmarks of cancer.Molecular biology reports · 2024
    Review
  6. Review
  7. Article
  8. Review
  9. Review
  10. Vitexin inhibits APEX1 to counteract the flow-induced endothelial inflammation.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  11. Article
  12. Review
  13. Article
  14. Endogenous oxidized DNA bases and APE1 regulate the formation of G-quadruplex structures in the genome.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Suppression of STAT3 NHMolecular carcinogenesis · 2018
    Article
  20. CREBBP and p300 lysine acetyl transferases in the DNA damage response.Cellular and molecular life sciences : CMLS · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Shiladitya SenguptaDepartment of Biochemistry & Molecular Biology, University of Texas Medical Branch, Galveston, TX 77555, USA.
Anil K ManthaDepartment of Biochemistry & Molecular Biology, University of Texas Medical Branch, Galveston, TX 77555, USA.
Heyu SongDepartment of Genetics, Cell Biology and Anatomy, University of Nebraska Medical Center, Omaha, NE 68198, USA.
Shrabasti RoychoudhuryDepartment of Genetics, Cell Biology and Anatomy, University of Nebraska Medical Center, Omaha, NE 68198, USA.
Somsubhra NathDepartment of Genetics, Cell Biology and Anatomy, University of Nebraska Medical Center, Omaha, NE 68198, USA.
Sutapa RayDepartment of Pediatrics, Hematology/Oncology Division, University of Nebraska Medical Center, Omaha, NE 68198, USA.
Kishor K BhakatDepartment of Biochemistry & Molecular Biology, University of Texas Medical Branch, Galveston, TX 77555, USA.
University of Nebraska Medical Center · USThe University of Texas Medical Branch at Galveston · US

Funding

Regulatory Functions of APE1 acetylationR01CA148941 · NCI · UNIVERSITY OF TEXAS MED BR GALVESTON · PI BHAKAT, KISHOR K · 2011 to 2015
$1.4M
NCI NIH HHS R01 CA148941
6 · The paper itself

Abstract

Apurinic/apyrimidinic (AP) sites are frequently generated in the genome by spontaneous depurination/depyrimidination or after removal of oxidized/modified bases by DNA glycosylases during the base excision repair (BER) pathway. Unrepaired AP sites are mutagenic and block DNA replication and transcription. The primary enzyme to repair AP sites in mammalian cells is AP endonuclease (APE1), which plays a key role in this repair pathway. Although overexpression of APE1 in diverse cancer types and its association with chemotherapeutic resistance are well documented, alteration of posttranslational modification of APE1 and modulation of its functions during tumorigenesis are largely unknown. Here, we show that both classical histone deacetylase HDAC1 and NAD+-dependent deacetylase SIRT1 regulate acetylation level of APE1 and acetylation of APE1 enhances its AP-endonuclease activity both in vitro and in cells. Modulation of APE1 acetylation level in cells alters AP site repair capacity of the cell extracts in vitro. Primary tumor tissues of diverse cancer types have higher level of acetylated APE1 (AcAPE1) compared to adjacent non-tumor tissue and exhibit enhanced AP site repair capacity. Importantly, in the absence of APE1 acetylation, cells accumulate AP sites in the genome and show increased sensitivity to DNA damaging agents. Together, our study demonstrates that elevation of acetylation level of APE1 in tumor could be a novel mechanism by which cells handle the elevated levels of DNA damages in response to genotoxic stress and maintain sustained proliferation.

Indexed as

DNA DamageDNA RepairAcetylationBinding SitesCell Line, TumorCell SurvivalDNA-(Apurinic or Apyrimidinic Site) LyaseHistone Deacetylase 1HumansNADNeoplasmsProtein BindingSirtuin 1APEX1 protein, humanDNA-(Apurinic or Apyrimidinic Site) LyaseHistone Deacetylase 1NADSirtuin 1acetylationapurinic/apyrimidinic endonuclease 1 (APE1)BERDNA damage repair

Identifiers

PMID27655688
PMCPMC5342734
OpenAlexW2523041883

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.