Evidence map›Paper›PMID 27655633›Full record

ArticleNucleic acids research2016

Dynamic peptides of human TPP1 fulfill diverse functions in telomere maintenance.

Malligarjunan Rajavel, Tivadar Orban, Mengyuan Xu, Wilnelly Hernandez-Sanchez, Maria de la Fuente, Krzysztof Palczewski, Derek J Taylor

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. POT1-TPP1 differentially regulates telomerase via POT1 His266 and as a function of single-stranded telomere DNA length.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Malligarjunan RajavelDepartment of Pharmacology, Case Western Reserve University, School of Medicine, Cleveland, OH 44106, USA.
Tivadar OrbanDepartment of Pharmacology, Case Western Reserve University, School of Medicine, Cleveland, OH 44106, USA.
Mengyuan XuDepartment of Pharmacology, Case Western Reserve University, School of Medicine, Cleveland, OH 44106, USA.
Wilnelly Hernandez-SanchezDepartment of Pharmacology, Case Western Reserve University, School of Medicine, Cleveland, OH 44106, USA.
Maria de la FuenteDepartment of Pharmacology, Case Western Reserve University, School of Medicine, Cleveland, OH 44106, USA.
Krzysztof PalczewskiDepartment of Pharmacology, Case Western Reserve University, School of Medicine, Cleveland, OH 44106, USA.
Derek J TaylorDepartment of Pharmacology, Case Western Reserve University, School of Medicine, Cleveland, OH 44106, USA derek.taylor@case.edu.
Case Western Reserve University · USUniversity School · US

Funding

Induction of cancer cell death by selective DNA misincorporationDP2CA186571 · NCI · CASE WESTERN RESERVE UNIVERSITY · PI TAYLOR, DEREK JAMES · 2013 to 2014
$2.6M
NCI NIH HHS DP2 CA186571
6 · The paper itself

Abstract

Telomeres are specialized nucleoprotein complexes that comprise the ends of linear chromosomes. Human telomeres end in a short, single-stranded DNA (ssDNA) overhang that is recognized and bound by two telomere proteins, POT1 and TPP1. Whereas POT1 binds directly to telomere ssDNA, its interaction with TPP1 is essential for localization of POT1 to the telomere. TPP1 also provides enhanced binding and sequence discrimination that regulates POT1-TPP1 interactions exclusively with telomere ssDNA. Finally, TPP1 recruits telomerase, the enzyme responsible for synthesis of telomere DNA, to the telomere. While the oligosaccharide-oligonucleotide-binding (OB)-fold domain of TPP1 has been solved by X-ray crystallography, the molecular interactions within the POT1-TPP1-ssDNA ternary complex and the conformational changes that contribute to its diverse functions remain ambiguous. We employed hydrogen/deuterium exchange combined with mass spectrometry to identify three peptides, all residing within the OB-fold of TPP1, that exhibit altered exchange rates upon complex formation or ssDNA binding. Mutation of these regions combined with functional assays revealed the diverse contributions of each moiety in protein-protein interactions, regulating telomerase activity or DNA-binding. Together, these functional data combined with biophysical analyses and homology modeling provide a molecular understanding of the diverse contributions of TPP1 in telomere maintenance.

Indexed as

Shelterin ComplexTelomere HomeostasisAmino Acid SequenceAminopeptidasesAnimalsCircular DichroismDipeptidyl-Peptidases and Tripeptidyl-PeptidasesDNAHumansMass SpectrometryModels, MolecularMutationPeptidesProtein BindingProtein ConformationProtein MultimerizationACD protein, humanAminopeptidasesDipeptidyl-Peptidases and Tripeptidyl-PeptidasesDNAPeptidesRecombinant Fusion ProteinsSerine ProteasesShelterin ComplexTelomeraseTelomere-Binding Proteins

Identifiers

PMID27655633
PMCPMC5137443
OpenAlexW2522514526

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.