Evidence map›Paper›PMID 27655399›Full record

ArticlePloS one

Microbial Characterization of Qatari Barchan Sand Dunes.

Sara Abdul Majid, Michael F Graw, Aspassia D Chatziefthimiou, Hanh Nguyen, Renee Richer, Michel Louge, Ali A Sultan, Patrick Schloss, Anthony G Hay

Open access · goldAbstract read
In one paragraph

Article in PloS one. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Culturing the desert microbiota.Frontiers in microbiology · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Sara Abdul MajidDepartment of Research, Weill Cornell Medical Qatar, Qatar Foundation, Doha, Qatar.
Michael F GrawDepartment of Microbiology, Cornell University, Ithaca, New York, United States of America.
Aspassia D ChatziefthimiouDepartment of Research, Weill Cornell Medical Qatar, Qatar Foundation, Doha, Qatar.
Hanh NguyenDepartment of Microbiology, Cornell University, Ithaca, New York, United States of America.
Renee RicherDepartment of Research, Weill Cornell Medical Qatar, Qatar Foundation, Doha, Qatar.
Michel LougeSibley School of Mechanical and Aerospace Engineering, Cornell University, Ithaca, New York, United States of America.
Ali A SultanDepartment of Research, Weill Cornell Medical Qatar, Qatar Foundation, Doha, Qatar.
Patrick SchlossDepartment of Microbiology and Immunology, University of Michigan, Ann Arbor, Michigan, United States of America.
Anthony G HayDepartment of Microbiology, Cornell University, Ithaca, New York, United States of America.
Cornell University · USWeill Cornell Medical College in Qatar · QAUniversity of Michigan–Ann Arbor · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study represents the first characterization of sand microbiota in migrating barchan sand dunes. Bacterial communities were studied through direct counts and cultivation, as well as 16S rRNA gene and metagenomic sequence analysis to gain an understanding of microbial abundance, diversity, and potential metabolic capabilities. Direct on-grain cell counts gave an average of 5.3 ± 0.4 x 105 cells g-1 of sand. Cultured isolates (N = 64) selected for 16S rRNA gene sequencing belonged to the phyla Actinobacteria (58%), Firmicutes (27%) and Proteobacteria (15%). Deep-sequencing of 16S rRNA gene amplicons from 18 dunes demonstrated a high relative abundance of Proteobacteria, particularly enteric bacteria, and a dune-specific-pattern of bacterial community composition that correlated with dune size. Shotgun metagenome sequences of two representative dunes were analyzed and found to have similar relative bacterial abundance, though the relative abundances of eukaryotic, viral and enterobacterial sequences were greater in sand from the dune closer to a camel-pen. Functional analysis revealed patterns similar to those observed in desert soils; however, the increased relative abundance of genes encoding sporulation and dormancy are consistent with the dune microbiome being well-adapted to the exceptionally hyper-arid Qatari desert.

Identifiers

PMID27655399
PMCPMC5031452
OpenAlexW2521933536

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.