Evidence map›Paper›PMID 27654641›Full record

ArticleFEBS letters2016

Inhibition of soluble guanylyl cyclase by small molecules targeting the catalytic domain.

Jagamya Vijayaraghavan, Kristopher Kramp, Michael E Harris, Focco van den Akker

Open access · bronzeAbstract readLetter
In one paragraph

Article in FEBS letters, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Jagamya VijayaraghavanDepartment of Biochemistry, Case Western Reserve University, Cleveland, OH, USA.
Kristopher KrampDepartment of Biochemistry, Case Western Reserve University, Cleveland, OH, USA.
Michael E HarrisDepartment of Biochemistry, Case Western Reserve University, Cleveland, OH, USA.
Focco van den AkkerDepartment of Biochemistry, Case Western Reserve University, Cleveland, OH, USA. focco.vandenakker@case.edu.
Case Western Reserve University · US

Funding

GRADUATE TRAINING IN CELLULAR AND MOLECULAR BIOLOGYT32GM008056 · NIGMS · CASE WESTERN RESERVE UNIVERSITY · PI DIEHL, JOHN ALAN, SNIDER, MARTIN D · 1985 to 2019
$7.1M
Soluble guanylyl cyclase: mechanisms of activation and modulationR01HL075329 · NHLBI · CASE WESTERN RESERVE UNIVERSITY · PI VAN DEN AKKER, FOCCO · 2005 to 2014
$2.7M
Mechanistic Enzymology of Phosphoryl Transfer EnzymesR01GM096000 · NIGMS · UNIVERSITY OF FLORIDA · PI HARRIS, MICHAEL E. · 2011 to 2017
$1.9M
NHLBI NIH HHS R01 HL075329NIGMS NIH HHS R01 GM096000NIGMS NIH HHS T32 GM008056
6 · The paper itself

Abstract

Soluble guanylyl cyclase (sGC) plays a crucial role in cyclic nucleotide signaling that regulates numerous important physiological processes. To identify new sGC inhibitors that may prevent the formation of the active catalytic domain conformation, we carried out an in silico docking screen targeting a 'backside pocket' of the inactive sGC catalytic domain structure. Compounds 1 and 2 were discovered to inhibit sGC even at high/saturating nitric oxide concentrations. Both compounds also inhibit the BAY 58-2667-activated sGC as well as BAY 41-2272-stimulated sGC activity. Additional biochemical analyses showed that compound 2 also inhibits the isolated catalytic domain, thus demonstrating functional binding to this domain. Both compounds have micromolar affinity for sGC and are potential leads to develop more potent sGC inhibitors.

Indexed as

AnimalsCatalytic DomainComputer SimulationEnzyme ActivationEnzyme InhibitorsHumansModels, MolecularMolecular Docking SimulationProtein BindingPyrazolesPyridinesSmall Molecule LibrariesSoluble Guanylyl Cyclase3-(4-Amino-5-cyclopropylpyrimidine-2-yl)-1-(2-fluorobenzyl)-1H-pyrazolo(3,4-b)pyridineEnzyme InhibitorsPyrazolesPyridinesSmall Molecule LibrariesSoluble Guanylyl Cyclaseenzyme inhibitionsoluble guanylyl cyclase

Identifiers

PMID27654641
PMCPMC5077689
OpenAlexW2521128255

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.