ArticleScientific reports2016
Genome-wide analysis of Dof transcription factors reveals functional characteristics during development and response to biotic stresses in pepper.
Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.
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Who cites it
42 citing papers in PubMed, 87 citations in OpenAlex.
- Dof Transcription Factors as Integrative Regulatory Hubs Linking Carbon-Nitrogen Metabolism, Development, and Environmental Signaling in Plants.Plant, cell & environment · 2026Review
- Genome-Wide Identification and Functional Characterization of theInternational journal of molecular sciences · 2026Article
- Genome-wide identification and abiotic stress response analysis of the oatFrontiers in plant science · 2026Article
- Discovery of Hub Genes Involved in Seed Development and Lipid Biosynthesis in Sea Buckthorn (Plants (Basel, Switzerland) · 2025Article
- Comprehensive analysis of Dof transcription factors inFrontiers in plant science · 2025Article
- Exploring CDF gene family in wild potato under salinity stress unveils promising candidates for developing climate-resilient crops.Scientific reports · 2024Article
- Genome-wide identification and molecular evolution of Dof gene family in Camellia oleifera.BMC genomics · 2024Article
- Identification and functional analysis of theFrontiers in plant science · 2024Article
- Identification of Dof transcription factors inFrontiers in genetics · 2024Article
- Genome-Wide Analysis of Barley bHLH Transcription Factors and the Functional Characterization ofInternational journal of molecular sciences · 2023Article
- Expression ofPlants (Basel, Switzerland) · 2023Article
- Identification of Photoperiod- and Phytohormone-Responsive DNA-Binding One Zinc Finger (Dof) Transcription Factors inInternational journal of molecular sciences · 2023Article
- Genome-wide survey and expression analysis of Dof transcription factor family in sweetpotato shed light on their promising functions in stress tolerance.Frontiers in plant science · 2023Article
- Editorial: Seed-environment interactions.Frontiers in plant science · 2023Article
- Identification and characterization ofFrontiers in plant science · 2023Article
- Article
- Genome-Wide Identification of theInternational journal of molecular sciences · 2022Article
- Genome-Wide Identification and Expression Analysis of Dof Transcription Factors in Lotus (Plants (Basel, Switzerland) · 2022Article
- Transcriptomics Advancement in the Complex Response of Plants to Viroid Infection.International journal of molecular sciences · 2022Review
- Magnesium- a Forgotten Element: Phenotypic Variation and Genome Wide Association Study in Turkish Common Bean Germplasm.Frontiers in genetics · 2022Article
Corrections and comments
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Authors and funding
5 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The DNA-binding with one zinc finger proteins (Dofs) are a plant-specific family of transcription factors. The Dofs are involved in a variety of biological processes such as phytohormone production, seed development, and environmental adaptation. Dofs have been previously identified in several plants, but not in pepper. We identified 33 putative Dof genes in pepper (CaDofs). To gain an overview of the CaDofs, we analyzed phylogenetic relationships, protein motifs, and evolutionary history. We divided the 33 CaDofs, containing 25 motifs, into four major groups distributed on eight chromosomes. We discovered an expansion of the CaDofs dated to a recent duplication event. Segmental duplication that occurred before the speciation of the Solanaceae lineages was predominant among the CaDofs. The global gene-expression profiling of the CaDofs by RNA-seq analysis showed distinct temporal and pathogen-specific variation during development and response to biotic stresses (two TMV strains, PepMoV, and Phytophthora capsici), suggesting functional diversity among the CaDofs. These results will provide the useful clues into the responses of Dofs in biotic stresses and promote a better understanding of their multiple function in pepper and other species.
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Registered trials
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