Evidence map›Paper›PMID 27653473›Full record

ArticleBiophysical journal2016

Microfluidic Cold-Finger Device for the Investigation of Ice-Binding Proteins.

Lotem Haleva, Yeliz Celik, Maya Bar-Dolev, Natalya Pertaya-Braun, Avigail Kaner, Peter L Davies, Ido Braslavsky

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.5field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 20 citations in OpenAlex.

  1. Review
  2. Review
  3. Peptidic Antifreeze Materials: Prospects and Challenges.International journal of molecular sciences · 2019
    Review
  4. Article
  5. Putting life on ice: bacteria that bind to frozen water.Journal of the Royal Society, Interface · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Lotem HalevaInstitute of Biochemistry, Food Science and Nutrition, Robert H. Smith Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, Rehovot, Israel.
Yeliz CelikDepartment of Physics and Astronomy, Ohio University, Athens, Ohio; Department of Physics and Physical Sciences, Marshall University, Huntington, West Virginia.
Maya Bar-DolevInstitute of Biochemistry, Food Science and Nutrition, Robert H. Smith Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, Rehovot, Israel.
Natalya Pertaya-BraunDepartment of Physics and Astronomy, Ohio University, Athens, Ohio.
Avigail KanerInstitute of Biochemistry, Food Science and Nutrition, Robert H. Smith Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, Rehovot, Israel.
Peter L DaviesDepartment of Biomedical and Molecular Sciences, Queen's University, Kingston, Canada.
Ido BraslavskyInstitute of Biochemistry, Food Science and Nutrition, Robert H. Smith Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, Rehovot, Israel; Department of Physics and Astronomy, Ohio University, Athens, Ohio. Electronic address: ido.braslavsky@mail.huji.ac.il.
Hebrew University of Jerusalem · ILOhio University · USQueen's University · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ice-binding proteins (IBPs) bind to ice crystals and control their structure, enlargement, and melting, thereby helping their host organisms to avoid injuries associated with ice growth. IBPs are useful in applications where ice growth control is necessary, such as cryopreservation, food storage, and anti-icing. The study of an IBP's mechanism of action is limited by the technological difficulties of in situ observations of molecules at the dynamic interface between ice and water. We describe herein a new, to our knowledge, apparatus designed to generate a controlled temperature gradient in a microfluidic chip, called a microfluidic cold finger (MCF). This device allows growth of a stable ice crystal that can be easily manipulated with or without IBPs in solution. Using the MCF, we show that the fluorescence signal of IBPs conjugated to green fluorescent protein is reduced upon freezing and recovers at melting. This finding strengthens the evidence for irreversible binding of IBPs to their ligand, ice. We also used the MCF to demonstrate the basal-plane affinity of several IBPs, including a recently described IBP from Rhagium inquisitor. Use of the MCF device, along with a temperature-controlled setup, provides a relatively simple and robust technique that can be widely used for further analysis of materials at the ice/water interface.

Indexed as

IceLab-On-A-Chip DevicesAnimalsAntifreeze ProteinsBacterial ProteinsColeopteraEquipment DesignEscherichia coliFish ProteinsFreezingGreen Fluorescent ProteinsInsect ProteinsLepidopteraMarinomonasMicroscopy, FluorescencePerciformesAntifreeze ProteinsBacterial ProteinsFish ProteinsGreen Fluorescent ProteinsIceInsect Proteins

Identifiers

PMID27653473
PMCPMC5034346
OpenAlexW2497642195

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.