Evidence map›Paper›PMID 27651456›Full record

ArticleNucleic acids research2016

Evolution of Arabidopsis protection of telomeres 1 alters nucleic acid recognition and telomerase regulation.

Amit Arora, Mark A Beilstein, Dorothy E Shippen

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.0field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Amit AroraDepartment of Biochemistry and Biophysics, Texas A&M University, 2128 TAMU, College Station, TX 77843, USA.
Mark A BeilsteinSchool of Plant Sciences, University of Arizona, Tucson, AZ 85721, USA.
Dorothy E ShippenDepartment of Biochemistry and Biophysics, Texas A&M University, 2128 TAMU, College Station, TX 77843, USA dshippen@tamu.edu.ORCID http://orcid.org/0000-0003-0562-2047
Texas A&M University · USUniversity of Arizona · US

Funding

Telomere Structure and Function in ArabidopsisR01GM065383 · NIGMS · TEXAS A&M UNIVERSITY SYSTEM · PI SHIPPEN, DOROTHY · 2002 to 2023
$6.8M
NIGMS NIH HHS R01 GM065383
6 · The paper itself

Abstract

Protection of telomeres (POT1) binds chromosome ends, recognizing single-strand telomeric DNA via two oligonucleotide/oligosaccharide binding folds (OB-folds). The Arabidopsis thaliana POT1a and POT1b paralogs are atypical: they do not exhibit telomeric DNA binding, and they have opposing roles in regulating telomerase activity. AtPOT1a stimulates repeat addition processivity of the canonical telomerase enzyme, while AtPOT1b interacts with a regulatory lncRNA that represses telomerase activity. Here, we show that OB1 of POT1a, but not POT1b, has an intrinsic affinity for telomeric DNA. DNA binding was dependent upon a highly conserved Phe residue (F65) that in human POT1 directly contacts telomeric DNA. F65A mutation of POT1a

Indexed as

Biological EvolutionArabidopsisArabidopsis ProteinsBinding SitesConserved SequenceModels, MolecularPhenylalanineProtein BindingProtein ConformationRNA, PlantShelterin ComplexTelomeraseTelomereTelomere-Binding ProteinsArabidopsis ProteinsPhenylalaninePot1 protein, ArabidopsisRNA, PlantShelterin ComplexTelomeraseTelomere-Binding Proteins

Identifiers

PMID27651456
PMCPMC5175356
OpenAlexW2523367042

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.