Evidence map›Paper›PMID 27651091›Full record

ArticleEmerging microbes & infections2016

Molecular epidemiology of human enterovirus 71 at the origin of an epidemic of fatal hand, foot and mouth disease cases in Cambodia.

Veasna Duong, Channa Mey, Marc Eloit, Huachen Zhu, Lucie Danet, Zhong Huang, Gang Zou, Arnaud Tarantola, Justine Cheval, Philippe Perot and 17 more

Open access · goldAbstract read
In one paragraph

Article in Emerging microbes & infections, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
5.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 70 citations in OpenAlex.

  1. Article
  2. Comprehensive Review on Viral RNA Extraction Strategies for Enhanced Molecular Diagnostics.Interdisciplinary perspectives on infectious diseases · 2025
    Review
  3. Review
  4. Article
  5. Review
  6. Experimental animal models for development of human enterovirus vaccine.Clinical and experimental vaccine research · 2023
    Review
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

27 authors at 10 institutions in 7 countries.

Veasna DuongPasteur Institute in Cambodia, Phnom Penh 12000, Cambodia.
Channa MeyPasteur Institute in Cambodia, Phnom Penh 12000, Cambodia.
Marc EloitPasteur Institute, Paris 75724, France.
Huachen ZhuState Key Laboratory of Emerging Infectious Diseases, School of Public Health, The University of Hong Kong, Hong Kong, China.
Lucie DanetPasteur Institute in Cambodia, Phnom Penh 12000, Cambodia.
Zhong HuangInstitut Pasteur in Shanghai, Shanghai 200025, China.
Gang ZouInstitut Pasteur in Shanghai, Shanghai 200025, China.
Arnaud TarantolaPasteur Institute in Cambodia, Phnom Penh 12000, Cambodia.
Justine ChevalPathoQuest, Paris 75015, France.
Philippe PerotPasteur Institute, Paris 75724, France.
Denis LaurentKantha Bopha Hospital, Phnom Penh 12000, Cambodia.
Beat RichnerKantha Bopha Hospital, Phnom Penh 12000, Cambodia.
Santy KyKantha Bopha Hospital, Phnom Penh 12000, Cambodia.
Sothy HengKantha Bopha Hospital, Phnom Penh 12000, Cambodia.ORCID http://orcid.org/0000-0003-4681-6681
Sok TouchMinistry of Health, Phnom Penh 12000, Cambodia.
Ly SovannMinistry of Health, Phnom Penh 12000, Cambodia.
Rogier van DoornOxford University Clinical Research Unit, Hospital for Tropical Diseases, Ho Chi Minh P1Q5, Vietnam.ORCID http://orcid.org/0000-0002-9807-1821
Thanh Tan TranOxford University Clinical Research Unit, Hospital for Tropical Diseases, Ho Chi Minh P1Q5, Vietnam.
Jeremy J FarrarOxford University Clinical Research Unit, Hospital for Tropical Diseases, Ho Chi Minh P1Q5, Vietnam.
David E WentworthJ. Craig Venter Institute, Rockville, MD 92037, USA.
Suman R DasJ. Craig Venter Institute, Rockville, MD 92037, USA.ORCID http://orcid.org/0000-0003-2496-9724
Timothy B StockwellJ. Craig Venter Institute, Rockville, MD 92037, USA.
Jean-Claude ManuguerraPasteur Institute, Paris 75724, France.
Francis DelpeyrouxPasteur Institute, Paris 75724, France.
Yi GuanState Key Laboratory of Emerging Infectious Diseases, School of Public Health, The University of Hong Kong, Hong Kong, China.
Ralf AltmeyerInstitut Pasteur in Shanghai, Shanghai 200025, China.
Philippe BuchyPasteur Institute in Cambodia, Phnom Penh 12000, Cambodia.
Institut Pasteur du Cambodge · KHBhabha Hospital · INInstitut Pasteur · FRInstitut Pasteur of Shanghai · CNJ. Craig Venter Institute · USHospital for Tropical Diseases · VNMinistry of Health · KHUniversity of Hong Kong · HKInserm · FROxford University Clinical Research Unit · VN

Funding

The J. Craig Venter Institute Genome Center for Infectious DiseasesU19AI110819 · NIAID · J. CRAIG VENTER INSTITUTE, INC. · PI TAN, GENE · 2014 to 2018
$29.7M
NIAID NIH HHS HHSN272200900007CNIAID NIH HHS U19 AI110819
6 · The paper itself

Abstract

Human enterovirus 71 (EV-A71) causes hand, foot and mouth disease (HFMD). EV-A71 circulates in many countries and has caused large epidemics, especially in the Asia-Pacific region, since 1997. In April 2012, an undiagnosed fatal disease with neurological involvement and respiratory distress occurred in young children admitted to the Kantha Bopha Children's Hospital in Phnom Penh, Cambodia. Most died within a day of hospital admission, causing public panic and international concern. In this study, we describe the enterovirus (EV) genotypes that were isolated during the outbreak in 2012 and the following year. From June 2012 to November 2013, 312 specimens were collected from hospitalized and ambulatory patients and tested by generic EV and specific EV-A71 reverse transcription PCR. EV-A71 was detected in 208 clinical specimens while other EVs were found in 32 patients. The VP1 gene and/or the complete genome were generated. Our phylogenetic sequencing analysis demonstrated that 80 EV-A71 strains belonged to the C4a subgenotype and 3 EV-A71 strains belonged to the B5 genotype. Furthermore, some lineages of EV-A71 were found to have appeared in Cambodia following separate introductions from neighboring countries. Nineteen EV A (CV-A6 and CV-A16), 9 EV B (EV-B83, CV-B3, CV-B2, CV-A9, E-31, E-2 and EV-B80) and 4 EV C (EV-C116, EV-C96, CV-A20 and Vaccine-related PV-3) strains were also detected. We found no molecular markers of disease severity. We report here that EV-A71 genotype C4 was the main etiological agent of a large outbreak of HFMD and particularly of severe forms associated with central nervous system infections. The role played by other EVs in the epidemic could not be clearly established.

Indexed as

Disease OutbreaksEpidemicsAdolescentAdultCambodiaChildChild, PreschoolEnterovirus A, HumanFemaleGenome, ViralGenotypeHand, Foot and Mouth DiseaseHospitalizationHumansInfantMaleRNA, Viral

Identifiers

PMID27651091
PMCPMC5113052
OpenAlexW2523685835

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.