Evidence map›Paper›PMID 27650333›Full record

ArticleThe Plant cell2016

Molecular Diversity of Terpene Synthases in the Liverwort Marchantia polymorpha.

Santosh Kumar, Chase Kempinski, Xun Zhuang, Ayla Norris, Sibongile Mafu, Jiachen Zi, Stephen A Bell, Stephen Eric Nybo, Scott E Kinison, Zuodong Jiang and 10 more

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 74 citations in OpenAlex.

  1. Review
  2. Article
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  4. Plant-fungi interactions inProceedings of the National Academy of Sciences of the United States of America · 2026
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  6. Review
  7. Molecules (Basel, Switzerland) · 2025
    Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Genome-wide detection and classification of terpene synthase genes inPhysiology and molecular biology of plants : an international journal of functional plant biology · 2021
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 5 institutions in 2 countries.

Santosh KumarPlant Biology Program and Department of Pharmaceutical Sciences, University of Kentucky, Lexington, Kentucky 40536-0082.ORCID 0000-0002-6605-6686
Chase KempinskiPlant Biology Program and Department of Pharmaceutical Sciences, University of Kentucky, Lexington, Kentucky 40536-0082.ORCID 0000-0002-5250-1291
Xun ZhuangPlant Biology Program and Department of Pharmaceutical Sciences, University of Kentucky, Lexington, Kentucky 40536-0082.
Ayla NorrisGradaute School of Genome Science and Technology, University of Tennessee, Knoxville, Tennessee 37996-0840.ORCID 0000-0002-7603-6726
Sibongile MafuRoy J. Carver Department of Biochemistry, Biophysics, and Molecular Biology, Iowa State University, Ames, Iowa 50011.ORCID 0000-0002-8049-8798
Jiachen ZiRoy J. Carver Department of Biochemistry, Biophysics, and Molecular Biology, Iowa State University, Ames, Iowa 50011.ORCID 0000-0002-0212-1282
Stephen A BellPlant Biology Program and Department of Pharmaceutical Sciences, University of Kentucky, Lexington, Kentucky 40536-0082.ORCID 0000-0001-8053-4042
Stephen Eric NyboPlant Biology Program and Department of Pharmaceutical Sciences, University of Kentucky, Lexington, Kentucky 40536-0082.ORCID 0000-0001-7884-7787
Scott E KinisonPlant Biology Program and Department of Pharmaceutical Sciences, University of Kentucky, Lexington, Kentucky 40536-0082.ORCID 0000-0002-0405-2655
Zuodong JiangPlant Biology Program and Department of Pharmaceutical Sciences, University of Kentucky, Lexington, Kentucky 40536-0082.
Sheba GoklanyPlant Biology Program and Department of Pharmaceutical Sciences, University of Kentucky, Lexington, Kentucky 40536-0082.ORCID 0000-0002-0737-5732
Kristin B LinscottPlant Biology Program and Department of Pharmaceutical Sciences, University of Kentucky, Lexington, Kentucky 40536-0082.ORCID 0000-0001-7145-4884
Xinlu ChenDepartment of Plant Sciences, University of Tennessee, Knoxville, Tennessee 37996-4561.ORCID 0000-0002-7560-6125
Qidong JiaGradaute School of Genome Science and Technology, University of Tennessee, Knoxville, Tennessee 37996-0840.
Shoshana D BrownDepartments of Bioengineering and Therapeutic Sciences and Pharmaceutical Chemistry, California Institute for Quantitative Biosciences, University of California, San Francisco, California 94158-2330.ORCID 0000-0002-0875-4902
John L BowmanSchool of Biological Sciences, Monash University, Melbourne, VIC 3800, Australia.ORCID 0000-0003-4691-8477
Patricia C BabbittDepartments of Bioengineering and Therapeutic Sciences and Pharmaceutical Chemistry, California Institute for Quantitative Biosciences, University of California, San Francisco, California 94158-2330.
Reuben J PetersRoy J. Carver Department of Biochemistry, Biophysics, and Molecular Biology, Iowa State University, Ames, Iowa 50011.ORCID 0000-0003-4691-8477
Feng ChenGradaute School of Genome Science and Technology, University of Tennessee, Knoxville, Tennessee 37996-0840.ORCID 0000-0002-0875-4902
Joe ChappellPlant Biology Program and Department of Pharmaceutical Sciences, University of Kentucky, Lexington, Kentucky 40536-0082 chappell@uky.edu.ORCID 0000-0001-8469-8976
University of Kentucky · USUniversity of Tennessee at Knoxville · USIowa State University · USUniversity of California, San Francisco · USMonash University · AU

Funding

Advancing Drug Development from Medicinal Plants using Transcriptomics and MetaboRC2GM092521 · NIGMS · UNIVERSITY OF KENTUCKY · PI CHAPPELL, JOE, DELLAPENNA, DEAN · 2009 to 2010
$6.0M
Laying the Foundation of Genomic EnzymologyR01GM060595 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BABBITT, PATRICIA CLEMENT · 2000 to 2018
$5.4M
Enzymatic formation of the hydrocarbon skeletons underlying diterpenoid diversityR01GM076324 · NIGMS · IOWA STATE UNIVERSITY · PI PETERS, REUBEN JOHN · 2006 to 2019
$3.4M
NIGMS NIH HHS R01 GM060595NIGMS NIH HHS R01 GM076324NIGMS NIH HHS RC2 GM092521
6 · The paper itself

Abstract

Marchantia polymorpha is a basal terrestrial land plant, which like most liverworts accumulates structurally diverse terpenes believed to serve in deterring disease and herbivory. Previous studies have suggested that the mevalonate and methylerythritol phosphate pathways, present in evolutionarily diverged plants, are also operative in liverworts. However, the genes and enzymes responsible for the chemical diversity of terpenes have yet to be described. In this study, we resorted to a HMMER search tool to identify 17 putative terpene synthase genes from M. polymorpha transcriptomes. Functional characterization identified four diterpene synthase genes phylogenetically related to those found in diverged plants and nine rather unusual monoterpene and sesquiterpene synthase-like genes. The presence of separate monofunctional diterpene synthases for ent-copalyl diphosphate and ent-kaurene biosynthesis is similar to orthologs found in vascular plants, pushing the date of the underlying gene duplication and neofunctionalization of the ancestral diterpene synthase gene family to >400 million years ago. By contrast, the mono- and sesquiterpene synthases represent a distinct class of enzymes, not related to previously described plant terpene synthases and only distantly so to microbial-type terpene synthases. The absence of a Mg

Indexed as

Alkyl and Aryl TransferasesEvolution, MolecularMarchantiaTranscriptomeAlkyl and Aryl Transferasesterpene synthase

Identifiers

PMID27650333
PMCPMC5134972
OpenAlexW2521172222

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.