Evidence map›Paper›PMID 27649990›Full record

ArticleMolecular biology reports2016

Characterization of 4 TaGAST genes during spike development and seed germination and their response to exogenous phytohormones in common wheat.

Yun Jeong Kim, Jae Yoon Kim, Jin Seok Yoon, Dae Yeon Kim, Min Jeong Hong, Yong Weon Seo

Abstract read
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Article in Molecular biology reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Yun Jeong KimDivision of Biotechnology, Korea University, Anam-Dong, Seongbuk-Gu, Seoul, 136-713, Republic of Korea.
Jae Yoon KimDivision of Biotechnology, Korea University, Anam-Dong, Seongbuk-Gu, Seoul, 136-713, Republic of Korea.
Jin Seok YoonDivision of Biotechnology, Korea University, Anam-Dong, Seongbuk-Gu, Seoul, 136-713, Republic of Korea.
Dae Yeon KimDivision of Biotechnology, Korea University, Anam-Dong, Seongbuk-Gu, Seoul, 136-713, Republic of Korea.
Min Jeong HongAdvanced Radiation Technology Institute, Korea Atomic Energy Research Institute, 29 Geumgu, Jeongeup, 580-185, Republic of Korea.
Yong Weon SeoDivision of Biotechnology, Korea University, Anam-Dong, Seongbuk-Gu, Seoul, 136-713, Republic of Korea. seoag@korea.ac.kr.
Korea University · KRKorea Atomic Energy Research Institute · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gibberellic acid (GA) is involved in the regulation of plant growth and development. We defined GA-stimulated transcript (GAST) gene family and characterized its four members (TaGAST1, 2, 3, and 4) in wheat spikes. Triticum aestivum whole spikes were collected at ten developmental stages and dehulled spikelets were obtained at various days after flowering. Expression of TaGAST1, 2, 3, and 4 was analyzed using RT-PCR at inflorescence development stages, in different tissues, and after phytohormones application. To identify proteins interacting with TaGAST1, yeast two-hybridization was performed and BiFC analysis was used for verification. TaGAST1 was expressed at the inflorescence stage and only expressed in seedlings under abscisic acid (ABA) treatment after phytohormone treatment. TaGAST2 and TaGAST3 showed moderate expression in the spike, vigorous transcript accumulation in the seedling, and up-regulation by exogenous GA in early germination stages. TaGAST4 was predominantly expressed in the seedling. Wheat cyclophilin A-1 (TaCypA1), identified as a TaGAST1-interacting protein, showed opposite expression pattern in the developing spike to TaGAST1. TaCypA1 transcript was slightly up-regulated by GA, slightly down-regulated by paclobutrazol, and was maintained after ABA treatment. The interaction of TaGAST1 with TaCypA1 is targeted to the plasma membrane. TaGAST1 was specifically expressed in the wheat spike and was stimulated by exogenous GA treatment. TaGAST2 and TaGAST3 expression in germinating seeds and seedlings was higher than that in the spike stage. TaGAST4 was not expressed in all developmental stages. TaGAST1 and TaCypA1 might be expressed antagonistically during wheat spike development.

Indexed as

GerminationAbscisic AcidChromosome MappingChromosomes, PlantFlowersGene ExpressionGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantGenes, PlantGibberellinsOrgan SpecificityPlant Growth RegulatorsPlant ProteinsRNA, MessengerSeedlingsSeedsAbscisic Acidgibberellic acidGibberellinsPlant Growth RegulatorsPlant ProteinsRNA, MessengerCommon wheatGibberellic acid-stimulated transcript geneSpike developmentTaCypA1TaGASTs

Identifiers

PMID27649990
OpenAlexW2521282267

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.