Evidence map›Paper›PMID 27647875›Full record

ArticleThe EMBO journal2016

TUT-DIS3L2 is a mammalian surveillance pathway for aberrant structured non-coding RNAs.

Dmytro Ustianenko, Josef Pasulka, Zuzana Feketova, Lukas Bednarik, Dagmar Zigackova, Andrea Fortova, Mihaela Zavolan, Stepanka Vanacova

Open access · hybridAbstract read
In one paragraph

Article in The EMBO journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 75 papers.

0numbers the graph read from it
0cells of the map it votes in
75citing papers in PubMed
7.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

75 citing papers in PubMed, 110 citations in OpenAlex.

  1. Article
  2. Article
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  4. Article
  5. DIS3L2-mediated RNA surveillance and extracellular vesicle packaging prevent innate immune activation by aberrant cellular RNAs.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  6. Advances in RNA modification in myocardial fibrosis (Review).International journal of molecular medicine · 2025
    Review
  7. Article
  8. Review
  9. Review
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  11. Article
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  13. Review
  14. Sm complex assembly and 5' cap trimethylation promote selective processing of snRNAs by the 3' exonuclease TOE1.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. ISG20L2: an RNA nuclease regulating T cell activation.Cellular and molecular life sciences : CMLS · 2023
    Article
  20. Article

15 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Dmytro UstianenkoCEITEC-Central European Institute of Technology, Masaryk University, Brno, Czech Republic.
Josef PasulkaCEITEC-Central European Institute of Technology, Masaryk University, Brno, Czech Republic.
Zuzana FeketovaCEITEC-Central European Institute of Technology, Masaryk University, Brno, Czech Republic.
Lukas BednarikCEITEC-Central European Institute of Technology, Masaryk University, Brno, Czech Republic.
Dagmar ZigackovaCEITEC-Central European Institute of Technology, Masaryk University, Brno, Czech Republic.
Andrea FortovaCEITEC-Central European Institute of Technology, Masaryk University, Brno, Czech Republic.
Mihaela ZavolanBiozentrum, University of Basel and Swiss Institute of Bioinformatics, Basel, Switzerland.
Stepanka VanacovaCEITEC-Central European Institute of Technology, Masaryk University, Brno, Czech Republic stepanka.vanacova@ceitec.muni.cz.ORCID 0000-0001-8807-0684
Central European Institute of Technology · CZSIB Swiss Institute of Bioinformatics · CH

Funding

Wellcome TrustWellcome Trust 084316/B/07/Z
6 · The paper itself

Abstract

Uridylation of various cellular RNA species at the 3' end has been generally linked to RNA degradation. In mammals, uridylated pre-let-7 miRNAs and mRNAs are targeted by the 3' to 5' exoribonuclease DIS3L2. Mutations in DIS3L2 have been associated with Perlman syndrome and with Wilms tumor susceptibility. Using in vivo cross-linking and immunoprecipitation (CLIP) method, we discovered the DIS3L2-dependent cytoplasmic uridylome of human cells. We found a broad spectrum of uridylated RNAs including rRNAs, snRNAs, snoRNAs, tRNAs, vault, 7SL, Y RNAs, mRNAs, lncRNAs, and transcripts from pseudogenes. The unifying features of most of these identified RNAs are aberrant processing and the presence of stable secondary structures. Most importantly, we demonstrate that uridylation mediates DIS3L2 degradation of short RNA polymerase II-derived RNAs. Our findings establish the role of DIS3L2 and oligouridylation as the cytoplasmic quality control for highly structured ncRNAs.

Indexed as

Cell LineExoribonucleasesHumansImmunoprecipitationNucleotidyltransferasesRNA, UntranslatedDIS3L2 protein, humanExoribonucleasesNucleotidyltransferasesRNA, UntranslatedDIS3L2ncRNAsRNA surveillanceTSSauridylation

Identifiers

PMID27647875
PMCPMC5069555
OpenAlexW2522639664

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.