Evidence map›Paper›PMID 27647836›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2016

Presentation of Cryptic Peptides by MHC Class I Is Enhanced by Inflammatory Stimuli.

Sharanya Prasad, Shelley R Starck, Nilabh Shastri

Open access · bronzeAbstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 45 citations in OpenAlex.

  1. Review
  2. Article
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  4. The persistent inflammation in COPD: is autoimmunity the core mechanism?European respiratory review : an official journal of the European Respiratory Society · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Sharanya PrasadDivision of Immunology and Pathogenesis, Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720.ORCID 0000-0002-7021-3664
Shelley R StarckDivision of Immunology and Pathogenesis, Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720.ORCID 0000-0001-6231-9082
Nilabh ShastriDivision of Immunology and Pathogenesis, Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720 nshastri@berkeley.edu.
University of California, Berkeley · US

Funding

Antigen Processing in the Secretory PathwayR37AI060040 · NIAID · UNIVERSITY OF CALIFORNIA BERKELEY · PI SADEGH-NASSERI, SCHEHERAZADE · 2012 to 2021
$4.2M
The Endogenous MHC Class I Antigen Processing PathwayR01AI039548 · NIAID · UNIVERSITY OF CALIFORNIA BERKELEY · PI SHASTRI, NILABH · 1997 to 2012
$3.8M
GENERATING ANTIGENIC PEPTIDE/MHC BY CRYPTIC TRANSLATIONR01AI044864 · NIAID · UNIVERSITY OF CALIFORNIA BERKELEY · PI SHASTRI, NILABH · 2000 to 2010
$2.9M
NIAID NIH HHS R01 AI039548NIAID NIH HHS R01 AI044864NIAID NIH HHS R37 AI060040
6 · The paper itself

Abstract

Cytolytic T cells eliminate infected or cancer cells by recognizing peptides presented by MHC class I molecules on the cell surface. The antigenic peptides are derived primarily from newly synthesized proteins including those produced by cryptic translation mechanisms. Previous studies have shown that cryptic translation can be initiated by distinct mechanisms at non-AUG codons in addition to conventional translation initiated at the canonical AUG start codon. In this study, we show that presentation of endogenously translated cryptic peptides is enhanced by TLR signaling pathways involved in pathogen recognition as well as by infection with different viruses. This enhancement of cryptic peptides was caused by proinflammatory cytokines, secreted in response to microbial infection. Furthermore, blocking these cytokines abrogated the enhancement of cryptic peptide presentation in response to infection. Thus, presentation of cryptic peptides is selectively enhanced during inflammation and infection, which could allow the immune system to detect intracellular pathogens that might otherwise escape detection because of inhibition of conventional host translation mechanisms.

Indexed as

Antigen PresentationAnimalsAntigens, ViralCells, CulturedCytokinesHerpesviridae InfectionsHistocompatibility Antigens Class IIInflammationInflammation MediatorsMacrophagesMiceMice, Inbred C57BLMice, TransgenicMuromegalovirusPeptidesProtein BiosynthesisAntigens, ViralCytokinesHistocompatibility Antigens Class IIInflammation MediatorsPeptidesToll-Like Receptors

Identifiers

PMID27647836
PMCPMC5101130
OpenAlexW2523529735

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.