Evidence map›Paper›PMID 27645998›Full record

ArticleThe Journal of biological chemistry2016

Chondroitin 4-O-Sulfotransferase Is Indispensable for Sulfation of Chondroitin and Plays an Important Role in Maintaining Normal Life Span and Oxidative Stress Responses in Nematodes.

Tomomi Izumikawa, Katsufumi Dejima, Yukiko Watamoto, Kazuko H Nomura, Nanako Kanaki, Marika Rikitake, Mai Tou, Daisuke Murata, Eri Yanagita, Ai Kano and 3 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
6.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it, 22 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Imaging Glycosaminoglycan Modification Patterns In Vivo.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  7. Review
  8. N-glycomic Complexity in Anatomical Simplicity:Frontiers in molecular biosciences · 2019
    Review
  9. Article
  10. Deciphering functional glycosaminoglycan motifs in development.Current opinion in structural biology · 2018
    Review
  11. Expanding the chondroitin glycoproteome ofThe Journal of biological chemistry · 2018
    Article
  12. Diverse roles for glycosaminoglycans in neural patterning.Developmental dynamics : an official publication of the American Association of Anatomists · 2018
    Review
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Tomomi IzumikawaFrom the Department of Biochemistry, Kobe Pharmaceutical University, Higashinada-ku, Kobe 658-8558, Japan.
Katsufumi Dejimathe Department of Biology, Faculty of Sciences, Kyushu University, Fukuoka 819-0395, Japan.
Yukiko WatamotoFrom the Department of Biochemistry, Kobe Pharmaceutical University, Higashinada-ku, Kobe 658-8558, Japan.
Kazuko H Nomurathe Department of Biology, Faculty of Sciences, Kyushu University, Fukuoka 819-0395, Japan.
Nanako Kanakithe Department of Biology, Faculty of Sciences, Kyushu University, Fukuoka 819-0395, Japan.
Marika Rikitakethe Department of Biology, Faculty of Sciences, Kyushu University, Fukuoka 819-0395, Japan.
Mai Touthe Department of Biology, Faculty of Sciences, Kyushu University, Fukuoka 819-0395, Japan.
Daisuke Muratathe Department of Biology, Faculty of Sciences, Kyushu University, Fukuoka 819-0395, Japan.
Eri Yanagitathe Department of Biology, Faculty of Sciences, Kyushu University, Fukuoka 819-0395, Japan.
Ai Kanothe Department of Biology, Faculty of Sciences, Kyushu University, Fukuoka 819-0395, Japan.
Shohei Mitanithe Department of Physiology, Tokyo Women's Medical University School of Medicine, Tokyo 162-8666, Japan, and.
Kazuya Nomurathe Department of Biology, Faculty of Sciences, Kyushu University, Fukuoka 819-0395, Japan knomuscb@kyushu-u.org.
Hiroshi KitagawaFrom the Department of Biochemistry, Kobe Pharmaceutical University, Higashinada-ku, Kobe 658-8558, Japan, kitagawa@kobepharma-u.ac.jp.
Kyushu University · JPKobe Pharmaceutical University · JPTokyo Women's Medical University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chondroitin sulfate (CS)/chondroitin (Chn) chains are indispensable for embryonic cell division and cytokinesis in the early developmental stages in Caenorhabditis elegans and mice, whereas heparan sulfate (HS) is essential for axon guidance during nervous system development. These data indicate that the fundamental functions of CS and HS are conserved from worms to mammals and that the function of CS/Chn differs from that of HS. Although previous studies have shown that C. elegans produces HS and non-sulfated Chn, whether the organism produces CS remains unclear. Here, we demonstrate that C. elegans produces a small amount of 4-O-sulfated Chn and report the identification of C41C4.1, an orthologue of the human chondroitin 4-O-sulfotransferase gene. Loss of C41C4.1 in C. elegans resulted in a decline in 4-O-sulfation of CS and an increase in the number of sulfated units in HS. C41C4.1 deletion mutants exhibited reduced survival rates after synchronization with sodium hypochlorite. Collectively, these results show for the first time that CS glycans are present in C. elegans and that the Chn 4-O-sulfotransferase responsible for the sulfation plays an important role in protecting nematodes from oxidative stress.

Indexed as

Oxidative StressAnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsCarbohydrate SulfotransferasesCell DivisionChondroitinChondroitin SulfatesFemaleHeparan SulfateMaleSequence DeletionSulfatesSulfotransferasesCaenorhabditis elegans ProteinsCarbohydrate SulfotransferasesChondroitinChondroitin Sulfateschst-1 protein, C elegansHeparan SulfateSulfatesSulfotransferasesCaenorhabditis elegans (C. elegans)chondroitin sulfateoxidative stressproteoglycansulfotransferase

Identifiers

PMID27645998
PMCPMC5087745
OpenAlexW2522384919

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.