Evidence map›Paper›PMID 27645996›Full record

ArticleThe Journal of biological chemistry2016

Lack of Heterologous Cross-reactivity toward HLA-A*02:01 Restricted Viral Epitopes Is Underpinned by Distinct αβT Cell Receptor Signatures.

Emma J Grant, Tracy M Josephs, Sophie A Valkenburg, Linda Wooldridge, Margaret Hellard, Jamie Rossjohn, Mandvi Bharadwaj, Katherine Kedzierska, Stephanie Gras

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. HLA-B*15:01-positive severe COVID-19 patients lack CD8Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  3. MR1 presents vitamin B6-related compounds for recognition by MR1-reactive T cells.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  4. Article
  5. CD8Nature communications · 2024
    Article
  6. CD8Clinical & translational immunology · 2024
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Grouping T-Cell Antigen Receptors by Specificity.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  13. Article
  14. Expansion of Unique Hepatitis C Virus-Specific Public CD8Journal of immunology (Baltimore, Md. : 1950) · 2021
    Article
  15. CD8Science immunology · 2021
    Article
  16. Article
  17. Suboptimal SARS-CoV-2-specific CD8Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  18. Article
  19. Article
  20. Broad CD8Nature communications · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 3 countries.

Emma J GrantFrom the Department of Microbiology and Immunology, University of Melbourne at the Peter Doherty Institute for Infection and Immunity, Parkville, Victoria 3010, Australia.
Tracy M Josephsthe Infection and Immunity Program and Department of Biochemistry and Molecular Biology, Biomedicine Discovery Institute, and; the Australian Research Council Centre of Excellence for Advanced Molecular Imaging, Monash University, Clayton, Victoria 3800, Australia.
Sophie A ValkenburgFrom the Department of Microbiology and Immunology, University of Melbourne at the Peter Doherty Institute for Infection and Immunity, Parkville, Victoria 3010, Australia.
Linda Wooldridgethe Faculty of Health Sciences, University of Bristol, Bristol BS8 1TD, United Kingdom.
Margaret Hellardthe Center for Research Excellence in Injecting Drug Use, Burnet Institute, Melbourne, Victoria 3004, Australia, and.
Jamie Rossjohnthe Infection and Immunity Program and Department of Biochemistry and Molecular Biology, Biomedicine Discovery Institute, and; the Australian Research Council Centre of Excellence for Advanced Molecular Imaging, Monash University, Clayton, Victoria 3800, Australia,; the Institute of Infection and Immunity, Cardiff University School of Medicine, Heath Park, Cardiff CF14 4XN, United Kingdom.
Mandvi BharadwajFrom the Department of Microbiology and Immunology, University of Melbourne at the Peter Doherty Institute for Infection and Immunity, Parkville, Victoria 3010, Australia.
Katherine KedzierskaFrom the Department of Microbiology and Immunology, University of Melbourne at the Peter Doherty Institute for Infection and Immunity, Parkville, Victoria 3010, Australia,. Electronic address: kkedz@unimelb.edu.au.
Stephanie Grasthe Infection and Immunity Program and Department of Biochemistry and Molecular Biology, Biomedicine Discovery Institute, and; the Australian Research Council Centre of Excellence for Advanced Molecular Imaging, Monash University, Clayton, Victoria 3800, Australia,. Electronic address: Stephanie.Gras@monash.edu.
University of Melbourne · AUDiscovery Institute · USAustralian Research Council · AUBurnet Institute · AUPeter Doherty Institute · AUUniversity of Bristol · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

αβT cell receptor (TCR) genetic diversity is outnumbered by the quantity of pathogenic epitopes to be recognized. To provide efficient protective anti-viral immunity, a single TCR ideally needs to cross-react with a multitude of pathogenic epitopes. However, the frequency, extent, and mechanisms of TCR cross-reactivity remain unclear, with conflicting results on anti-viral T cell cross-reactivity observed in humans. Namely, both the presence and lack of T cell cross-reactivity have been reported with HLA-A*02:01-restricted epitopes from the Epstein-Barr and influenza viruses (BMLF-1 and M1

Indexed as

Epitopes, T-LymphocyteFemaleHerpesvirus 4, HumanHLA-A2 AntigenHumansInfluenza A virusMalePhosphoproteinsReceptors, Antigen, T-Cell, alpha-betaT-LymphocytesTrans-ActivatorsViral Matrix ProteinsEpitopes, T-LymphocyteHLA-A*02:01 antigenHLA-A2 AntigenM1 protein, Influenza A virusPhosphoproteinsReceptors, Antigen, T-Cell, alpha-betaSM protein, Human herpesvirus 4Trans-ActivatorsViral Matrix Proteinscellular immune responseEpstein-Barr virusHepatitis C virus (HCV)Human Leukocyte Antigeninfluenza viruslymphocytemajor histocompatibility complex (MHC)T cell immunityviral immunology

Identifiers

PMID27645996
PMCPMC5114392
OpenAlexW2523044687

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.