Evidence map›Paper›PMID 27645136›Full record

ArticlePlant molecular biology2016

Arabidopsis acyl-CoA-binding protein ACBP6 localizes in the phloem and affects jasmonate composition.

Zi-Wei Ye, Shiu-Cheung Lung, Tai-Hua Hu, Qin-Fang Chen, Yung-Lee Suen, Mingfu Wang, Susanne Hoffmann-Benning, Edward Yeung, Mee-Len Chye

Abstract read
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In one paragraph

Article in Plant molecular biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 32 citations in OpenAlex.

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  8. Review
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  11. Review
  12. Article
  13. JASSY, a chloroplast outer membrane protein required for jasmonate biosynthesis.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  14. Article
  15. Overexpression ofFrontiers in plant science · 2018
    Article
  16. Article
  17. Review
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  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 3 countries.

Zi-Wei YeSchool of Biological Sciences, The University of Hong Kong, Pokfulam Road, Hong Kong, China.
Shiu-Cheung LungSchool of Biological Sciences, The University of Hong Kong, Pokfulam Road, Hong Kong, China.
Tai-Hua HuSchool of Biological Sciences, The University of Hong Kong, Pokfulam Road, Hong Kong, China.
Qin-Fang ChenSchool of Biological Sciences, The University of Hong Kong, Pokfulam Road, Hong Kong, China.
Yung-Lee SuenSchool of Biological Sciences, The University of Hong Kong, Pokfulam Road, Hong Kong, China.
Mingfu WangSchool of Biological Sciences, The University of Hong Kong, Pokfulam Road, Hong Kong, China.
Susanne Hoffmann-BenningDepartment of Biochemistry and Molecular Biology, Michigan State University, East Lansing, MI, 48824, USA.
Edward YeungDepartment of Biological Sciences, University of Calgary, Calgary, AB, T2N 1N4, Canada.
Mee-Len ChyeSchool of Biological Sciences, The University of Hong Kong, Pokfulam Road, Hong Kong, China. mlchye@hku.hk.
University of Hong Kong · HKMichigan State University · USUniversity of Calgary · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Arabidopsis thaliana ACYL-COA-BINDING PROTEIN6 (AtACBP6) encodes a cytosolic 10-kDa AtACBP. It confers freezing tolerance in transgenic Arabidopsis, possibly by its interaction with lipids as indicated by the binding of acyl-CoA esters and phosphatidylcholine to recombinant AtACBP6. Herein, transgenic Arabidopsis transformed with an AtACBP6 promoter-driven β-glucuronidase (GUS) construct exhibited strong GUS activity in the vascular tissues. Immunoelectron microscopy using anti-AtACBP6 antibodies showed AtACBP6 localization in the phloem especially in the companion cells and sieve elements. Also, the presence of gold grains in the plasmodesmata indicated its potential role in systemic trafficking. The AtACBP6 protein, but not its mRNA, was found in phloem exudate of wild-type Arabidopsis. Fatty acid profiling using gas chromatography-mass spectrometry revealed an increase in the jasmonic acid (JA) precursor, 12-oxo-cis,cis-10,15-phytodienoic acid (cis-OPDA), and a reduction in JA and/or its derivatives in acbp6 phloem exudates in comparison to the wild type. Quantitative real-time PCR showed down-regulation of COMATOSE (CTS) in acbp6 rosettes suggesting that AtACBP6 affects CTS function. AtACBP6 appeared to affect the content of JA and/or its derivatives in the sieve tubes, which is consistent with its role in pathogen-defense and in its wound-inducibility of AtACBP6pro::GUS. Taken together, our results suggest the involvement of AtACBP6 in JA-biosynthesis in Arabidopsis phloem tissues.

Indexed as

ArabidopsisArabidopsis ProteinsCarrier ProteinsCyclopentanesOxylipinsPhloemACBP6 protein, ArabidopsisArabidopsis ProteinsCarrier ProteinsCyclopentanesjasmonic acidOxylipinsAcyl-CoA-binding proteinArabidopsisCompanion cellOPDAPhloem exudatesSieve elements

Identifiers

PMID27645136
OpenAlexW2522363630

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.