Evidence map›Paper›PMID 27642787›Full record

ArticleNature cell biology2016

iPSC-derived cardiomyocytes reveal abnormal TGF-β signalling in left ventricular non-compaction cardiomyopathy.

Kazuki Kodo, Sang-Ging Ong, Fereshteh Jahanbani, Vittavat Termglinchan, Keiichi Hirono, Kolsoum InanlooRahatloo, Antje D Ebert, Praveen Shukla, Oscar J Abilez, Jared M Churko and 7 more

Abstract read
In one paragraph

Article in Nature cell biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 120 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
120citing papers in PubMed, 2 pooled it
11.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

120 citing papers in PubMed, 2 syntheses or guidelines pooled it, 171 citations in OpenAlex.

  1. Circulation. Genomic and precision medicine · 2023
    Pooled it
  2. Clinical and genetic insights into non-compaction: a meta-analysis and systematic review on 7598 individuals.Clinical research in cardiology : official journal of the German Cardiac Society · 2019
    Pooled it
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60 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 3 institutions in 2 countries.

Kazuki KodoStanford Cardiovascular Institute, Stanford University School of Medicine, Stanford, California 94305, USA.
Sang-Ging OngStanford Cardiovascular Institute, Stanford University School of Medicine, Stanford, California 94305, USA.
Fereshteh JahanbaniDepartment of Genetics, Stanford University School of Medicine, Stanford, California 94305, USA.
Vittavat TermglinchanStanford Cardiovascular Institute, Stanford University School of Medicine, Stanford, California 94305, USA.
Keiichi HironoDepartment of Pediatrics, University of Toyama, Toyama-shi, Toyama 930-8555, Japan.
Kolsoum InanlooRahatlooStanford Cardiovascular Institute, Stanford University School of Medicine, Stanford, California 94305, USA.
Antje D EbertStanford Cardiovascular Institute, Stanford University School of Medicine, Stanford, California 94305, USA.
Praveen ShuklaStanford Cardiovascular Institute, Stanford University School of Medicine, Stanford, California 94305, USA.
Oscar J AbilezStanford Cardiovascular Institute, Stanford University School of Medicine, Stanford, California 94305, USA.ORCID 0000-0002-9991-400X
Jared M ChurkoStanford Cardiovascular Institute, Stanford University School of Medicine, Stanford, California 94305, USA.
Ioannis KarakikesStanford Cardiovascular Institute, Stanford University School of Medicine, Stanford, California 94305, USA.
Gwanghyun JungStanford Cardiovascular Institute, Stanford University School of Medicine, Stanford, California 94305, USA.
Fukiko IchidaDepartment of Pediatrics, University of Toyama, Toyama-shi, Toyama 930-8555, Japan.
Sean M WuStanford Cardiovascular Institute, Stanford University School of Medicine, Stanford, California 94305, USA.
Michael P SnyderDepartment of Genetics, Stanford University School of Medicine, Stanford, California 94305, USA.
Daniel BernsteinStanford Cardiovascular Institute, Stanford University School of Medicine, Stanford, California 94305, USA.
Joseph C WuStanford Cardiovascular Institute, Stanford University School of Medicine, Stanford, California 94305, USA.
Cardiovascular Institute of the South · USStanford University · USUniversity of Toyama · JP

Funding

Project 3: Effect of Age and Longevity Genes on Epigenomic MechanismsP01GM099130 · NIGMS · STANFORD UNIVERSITY · PI WEISSMAN, SHERMAN MORTON · 2011 to 2015
$11.4M
Biorepository of Human iPSCs for Studying Dilated and Hypertrophic CardiomyopathyR24HL117756 · NHLBI · STANFORD UNIVERSITY · PI BUSTAMANTE, CARLOS DANIEL, SNYDER, MICHAEL P. · 2014 to 2018
$8.8M
Induced pluripotent stem cells in the understanding and treatment of heart diseaseU01HL099776 · NHLBI · STANFORD UNIVERSITY · PI LONGAKER, MICHAEL T, WU, JOSEPH C. · 2009 to 2015
$8.2M
Elucidating Mechanism of Cardiac Fibrosis with Cell Village of Pooled Human iPSCsR01HL130020 · NHLBI · STANFORD UNIVERSITY · PI Ronglih Liao, MARK MERCOLA · 2016 to 2026
$7.3M
Human Induced Pluripotent Stem Cells for Cardiovascular Disease ModelingR01HL113006 · NHLBI · STANFORD UNIVERSITY · PI WU, JOSEPH C. · 2012 to 2025
$6.8M
Genome Editing of Human iPSCs to Study Inherited Hypertrophic CardiomyopathyR01HL126527 · NHLBI · STANFORD UNIVERSITY · PI QI, LEI STANLEY, WU, JOSEPH C. · 2015 to 2022
$5.4M
Modeling Susceptibility to Chemotherapy-Induced Cardiotoxicity Using Human iPSCsR01HL123968 · NHLBI · STANFORD UNIVERSITY · PI QUERTERMOUS, THOMAS, WU, JOSEPH C. · 2014 to 2021
$4.8M
Enabling Technologies for Human-Machine Hybrid TissuesDP1LM012179 · NLM · STANFORD UNIVERSITY · PI WU, SEAN M · 2014 to 2018
$3.8M
A Systems Biology Approach to Study Cardiac Arrhythmias: iPS Cells and In Silico ModelingR01HL128170 · NHLBI · STANFORD UNIVERSITY · PI ALTMAN, RUSS BIAGIO, CLANCY, COLLEEN E · 2015 to 2018
$3.0M
Optogenetic Engineered Heart Muscle for Disease ModelingK01HL130608 · NHLBI · STANFORD UNIVERSITY · PI ABILEZ, OSCAR JOHN · 2016 to 2020
$862k
Cardiac Mitohormesis Protects Against Diabetic Cardiomyopathy Through MitophagyK99HL130416 · NHLBI · STANFORD UNIVERSITY · PI ONG, SANG GING · 2016 to 2017
$258k
B-adrenergic receptor (B-AR) signaling pathways in human induced pluripotent stem cell-derived cardiomyocytes, hiPSC-CMsF32HL126348 · NHLBI · STANFORD UNIVERSITY · PI JUNG, GWANGHYUN · 2015 to 2017
$184k
NHLBI NIH HHS F32 HL126348NHLBI NIH HHS K01 HL130608NHLBI NIH HHS K99 HL130416NHLBI NIH HHS R01 HL113006NHLBI NIH HHS R01 HL123968NHLBI NIH HHS R01 HL126527NHLBI NIH HHS R01 HL128170NHLBI NIH HHS R01 HL130020NHLBI NIH HHS R24 HL117756NHLBI NIH HHS U01 HL099776NIGMS NIH HHS P01 GM099130NLM NIH HHS DP1 LM012179
6 · The paper itself

Abstract

Left ventricular non-compaction (LVNC) is the third most prevalent cardiomyopathy in children and its pathogenesis has been associated with the developmental defect of the embryonic myocardium. We show that patient-specific induced pluripotent stem cell-derived cardiomyocytes (iPSC-CMs) generated from LVNC patients carrying a mutation in the cardiac transcription factor TBX20 recapitulate a key aspect of the pathological phenotype at the single-cell level and this was associated with perturbed transforming growth factor beta (TGF-β) signalling. LVNC iPSC-CMs have decreased proliferative capacity due to abnormal activation of TGF-β signalling. TBX20 regulates the expression of TGF-β signalling modifiers including one known to be a genetic cause of LVNC, PRDM16, and genome editing of PRDM16 caused proliferation defects in iPSC-CMs. Inhibition of TGF-β signalling and genome correction of the TBX20 mutation were sufficient to reverse the disease phenotype. Our study demonstrates that iPSC-CMs are a useful tool for the exploration of pathological mechanisms underlying poorly understood cardiomyopathies including LVNC.

Indexed as

CardiomyopathiesHeart Defects, CongenitalHeart VentriclesHumansInduced Pluripotent Stem CellsMutationMyocytes, CardiacPhenotypeSignal TransductionT-Box Domain ProteinsTransforming Growth Factor betaT-Box Domain ProteinsTBX20 protein, humanTransforming Growth Factor beta

Identifiers

PMID27642787
PMCPMC5042877
OpenAlexW2521812185

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.