ArticleScientific reports2016
DNA barcoding reveal patterns of species diversity among northwestern Pacific molluscs.
Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.
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Who cites it
11 citing papers in PubMed.
- Population genetic patterns across the native and invasive range of a widely distributed seagrass: Phylogeographic structure, invasive history and conservation implications.Diversity & distributions · 2024Article
- Genetic and Haplotype Diversity of Manila ClamAnimals : an open access journal from MDPI · 2023Article
- DNA barcoding as a valuable tool for delimiting mollusk species of the genusFrontiers in cellular and infection microbiology · 2023Article
- Wireworm (Coleoptera: Elateridae) genomic analysis reveals putative cryptic species, population structure, and adaptation to pest control.Communications biology · 2020Article
- Population genetics and sympatric divergence of the freshwater gudgeon,Ecology and evolution · 2020Article
- A newly discovered radiation of endoparasitic gastropods and their coevolution with asteroid hosts in Antarctica.BMC evolutionary biology · 2019Article
- DNA metabarcoding adds valuable information for management of biodiversity in roadside stormwater ponds.Ecology and evolution · 2019Article
- From marine park to future genomic observatory? Enhancing marine biodiversity assessments using a biocode approach.Biodiversity data journal · 2019Article
- Evidence for co-invasion events: different chigger species (Actinotrichida, Trombidioidea: trombiculidae) share a host.Experimental & applied acarology · 2018Article
- Karyotype differentiation in tellin shells (Bivalvia: Tellinidae).BMC genetics · 2017Article
- Genetic diversity of armored scales (Hemiptera: Diaspididae) and soft scales (Hemiptera: Coccidae) in Chile.Scientific reports · 2017Article
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Authors and funding
15 authors.
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Abstract
This study represents the first comprehensive molecular assessment of northwestern Pacific molluscs. In total, 2801 DNA barcodes belonging to 569 species from China, Japan and Korea were analyzed. An overlap between intra- and interspecific genetic distances was present in 71 species. We tested the efficacy of this library by simulating a sequence-based specimen identification scenario using Best Match (BM), Best Close Match (BCM) and All Species Barcode (ASB) criteria with three threshold values. BM approach returned 89.15% true identifications (95.27% when excluding singletons). The highest success rate of congruent identifications was obtained with BCM at 0.053 threshold. The analysis of our barcode library together with public data resulted in 582 Barcode Index Numbers (BINs), 72.2% of which was found to be concordantly with morphology-based identifications. The discrepancies were divided in two groups: sequences from different species clustered in a single BIN and conspecific sequences divided in one more BINs. In Neighbour-Joining phenogram, 2,320 (83.0%) queries fromed 355 (62.4%) species-specific barcode clusters allowing their successful identification. 33 species showed paraphyletic and haplotype sharing. 62 cases are represented by deeply diverged lineages. This study suggest an increased species diversity in this region, highlighting taxonomic revision and conservation strategy for the cryptic complexes.
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