Evidence map›Paper›PMID 27637093›Full record

ArticleJournal of hazardous materials2017

Detoxification of polycyclic aromatic hydrocarbons (PAHs) in Arabidopsis thaliana involves a putative flavonol synthase.

Juan C Hernández-Vega, Brian Cady, Gilbert Kayanja, Anthony Mauriello, Natalie Cervantes, Andrea Gillespie, Lisa Lavia, Joshua Trujillo, Merianne Alkio, Adán Colón-Carmona

Open access · greenAbstract read
In one paragraph

Article in Journal of hazardous materials, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 52 citations in OpenAlex.

  1. Article
  2. Article
  3. Molecular Defensive Mechanism ofInternational journal of molecular sciences · 2023
    Article
  4. Physiological and Biochemical Responses ofInternational journal of molecular sciences · 2023
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Assessment of oxidative stress response genes inBiotechnology reports (Amsterdam, Netherlands) · 2020
    Article
  12. Article
  13. Review
  14. International journal of molecular sciences · 2019
    Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Juan C Hernández-VegaDepartment of Biology, University of Massachusetts Boston, 100 Morrissey Blvd., Boston, MA 02125, USA.
Brian CadyDepartment of Biology, University of Massachusetts Boston, 100 Morrissey Blvd., Boston, MA 02125, USA.
Gilbert KayanjaDepartment of Biology, University of Massachusetts Boston, 100 Morrissey Blvd., Boston, MA 02125, USA.
Anthony MaurielloDepartment of Biology, University of Massachusetts Boston, 100 Morrissey Blvd., Boston, MA 02125, USA.
Natalie CervantesDepartment of Biology, University of Massachusetts Boston, 100 Morrissey Blvd., Boston, MA 02125, USA.
Andrea GillespieDepartment of Biology, University of Massachusetts Boston, 100 Morrissey Blvd., Boston, MA 02125, USA.
Lisa LaviaDepartment of Biology, University of Massachusetts Boston, 100 Morrissey Blvd., Boston, MA 02125, USA.
Joshua TrujilloDepartment of Biology, University of Massachusetts Boston, 100 Morrissey Blvd., Boston, MA 02125, USA.
Merianne AlkioCalvinstr. 25, D-24114 Kiel, Germany.
Adán Colón-CarmonaDepartment of Biology, University of Massachusetts Boston, 100 Morrissey Blvd., Boston, MA 02125, USA. Electronic address: adan.colon-carmona@umb.edu.
University of Massachusetts Boston · US

Funding

GRADUATE TRAINING IN BIOCHEMISTRY AND MOLECULAR BIOLOGYT32GM008659 · NIGMS · UNIVERSITY OF ARIZONA · PI CAPALDI, ANDREW PAUL, WEINERT, TED A. · 1997 to 2019
$5.3M
Initiative for Maximizing Student Diversity at UMass BostonR25GM076321 · NIGMS · UNIVERSITY OF MASSACHUSETTS BOSTON · PI COLON-CARMONA, ADAN, SKVIRSKY, RACHEL · 2008 to 2022
$4.5M
NIGMS NIH HHS R25 GM076321NIGMS NIH HHS T32 GM008659
6 · The paper itself

Abstract

Polycyclic aromatic hydrocarbons (PAHs) are environmental contaminants with cytotoxic, teratogenic and carcinogenic properties. Bioremediation studies with bacteria have led to the identification of dioxygenases (DOXs) in the first step to degrade these recalcitrant compounds. In this study, we characterized the role of the Arabidopsis thaliana AT5G05600, a putative DOX of the flavonol synthase family, in the transformation of PAHs. Phenotypic analysis of loss-of-function mutant lines showed that these plant lines were less sensitive to the toxic effects of phenanthrene, suggesting possible roles of this gene in PAH degradation in vivo. Interestingly, these mutant lines showed less accumulation of H

Indexed as

Plants, Genetically ModifiedArabidopsisBiodegradation, EnvironmentalHydrogen PeroxideMutationOxidoreductasesPhenanthrenesPlant ProteinsPolycyclic Aromatic HydrocarbonsSoil Pollutantsflavonol synthaseHydrogen PeroxideOxidoreductasesphenanthrenePhenanthrenesPlant ProteinsPolycyclic Aromatic HydrocarbonsSoil PollutantsArabidopsis thalianaDioxygenasesOxidative stressPhytoremediationPolycyclic aromatic hydrocarbons (PAHs)

Identifiers

PMID27637093
PMCPMC5373802
OpenAlexW2508053358

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.