Evidence map›Paper›PMID 27635394›Full record

ArticleInternational journal of genomics2016

Genome-Wide Analysis of Genes Encoding Methionine-Rich Proteins in Arabidopsis and Soybean Suggesting Their Roles in the Adaptation of Plants to Abiotic Stress.

Ha Duc Chu, Quynh Ngoc Le, Huy Quang Nguyen, Dung Tien Le

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Article in International journal of genomics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Ha Duc ChuNational Key Laboratory of Plant and Cell Technology, Agricultural Genetics Institute, Vietnam Academy of Agricultural Sciences, Pham Van Dong Road, Hanoi, Vietnam.
Quynh Ngoc LeNational Key Laboratory of Plant and Cell Technology, Agricultural Genetics Institute, Vietnam Academy of Agricultural Sciences, Pham Van Dong Road, Hanoi, Vietnam; Department of Biochemistry and Plant Physiology, Faculty of Biology, VNU-University of Science, Vietnam National University-Hanoi, Nguyen Trai Street, Hanoi, Vietnam.
Huy Quang NguyenDepartment of Biochemistry and Plant Physiology, Faculty of Biology, VNU-University of Science, Vietnam National University-Hanoi, Nguyen Trai Street, Hanoi, Vietnam.
Dung Tien LeNational Key Laboratory of Plant and Cell Technology, Agricultural Genetics Institute, Vietnam Academy of Agricultural Sciences, Pham Van Dong Road, Hanoi, Vietnam.ORCID 0000-0002-5117-3476
Agricultural Genetics Institute · VNVietnam National University, Hanoi · VN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Oxidation and reduction of methionine (Met) play important roles in scavenging reactive oxygen species (ROS) and signaling in living organisms. To understand the impacts of Met oxidation and reduction in plants during stress, we surveyed the genomes of Arabidopsis and soybean (Glycine max L.) for genes encoding Met-rich proteins (MRPs). We found 121 and 213 genes encoding MRPs in Arabidopsis and soybean, respectively. Gene annotation indicated that those with known function are involved in vital cellular processes such as transcriptional control, calcium signaling, protein modification, and metal transport. Next, we analyzed the transcript levels of MRP-coding genes under normal and stress conditions. We found that 57 AtMRPs were responsive either to drought or to high salinity stress in Arabidopsis; 35 GmMRPs were responsive to drought in the leaf of late vegetative or early reproductive stages of soybean. Among the MRP genes with a known function, the majority of the abiotic stress-responsive genes are involved in transcription control and calcium signaling. Finally, Arabidopsis plant which overexpressed an MRP-coding gene, whose transcripts were downregulated by abiotic stress, was more sensitive to paraquat than the control. Taken together, our report indicates that MRPs participate in various vital processes of plants under normal and stress conditions.

Identifiers

PMID27635394
PMCPMC5007304
OpenAlexW2516284516

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.