ArticlePeerJ2016
Genome-wide identification and characterization of GRAS transcription factors in sacred lotus (Nelumbo nucifera).
Article in PeerJ, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers, 1 of them a synthesis that pooled it.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
28 citing papers in PubMed, 1 synthesis or guideline pooled it, 40 citations in OpenAlex.
- Early "Rootprints" of Plant Terrestrialization: Selaginella Root Development Sheds Light on Root Evolution in Vascular Plants.Frontiers in plant science · 2021Pooled it
- Genome-Wide Characterization of theLife (Basel, Switzerland) · 2026Article
- Identification of two new GRAS transcription factors and expression analysis of these genes inFrontiers in plant science · 2025Article
- Article
- Genome-Wide Identification and Expression Analysis of the GRAS Gene Family and Their Responses to Heat Stress inInternational journal of molecular sciences · 2024Article
- Genome-Wide Identification, Expression and Stress Analysis of the GRAS Gene Family inPlants (Basel, Switzerland) · 2023Article
- Genome-wide identification and expression analysis of theFrontiers in plant science · 2023Article
- Cellular and gene expression patterns associated with root bifurcation in Selaginella.Plant physiology · 2022Article
- Identification of the NAC Transcription Factors and Their Function in ABA and Salinity Response inInternational journal of molecular sciences · 2022Article
- Multifaceted roles of GRAS transcription factors in growth and stress responses in plants.iScience · 2022Review
- Comprehensive Analysis for GRF Transcription Factors in Sacred Lotus (International journal of molecular sciences · 2022Review
- Article
- The GRAS gene family and its roles in seed development in litchi (Litchi chinensis Sonn).BMC plant biology · 2021Article
- Nelumbo genome database, an integrative resource for gene expression and variants of Nelumbo nucifera.Scientific data · 2021Article
- Genome-wide identification of MADS-box gene family in sacred lotus (Nelumbo nucifera) identifies a SEPALLATA homolog gene involved in floral development.BMC plant biology · 2020Article
- Identification and Bioinformatic Analysis of thePlants (Basel, Switzerland) · 2020Article
- Genome-Wide Characterization of GRAS Family and Their Potential Roles in Cold Tolerance of Cucumber (International journal of molecular sciences · 2020Article
- Transcriptome-Wide Identification, Evolutionary Analysis, and GA Stress Response of thePlants (Basel, Switzerland) · 2020Article
- Article
- Identification and Expression Analysis of GRAS Transcription Factors to Elucidate Candidate Genes Related to Stolons, Fruit Ripening and Abiotic Stresses in Woodland Strawberry (International journal of molecular sciences · 2019Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
6 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The GRAS gene family is one of the most important plant-specific gene families, which encodes transcriptional regulators and plays an essential role in plant development and physiological processes. The GRAS gene family has been well characterized in many higher plants such as Arabidopsis, rice, Chinese cabbage, tomato and tobacco. In this study, we identified 38 GRAS genes in sacred lotus (Nelumbo nucifera), analyzed their physical and chemical characteristics and performed phylogenetic analysis using the GRAS genes from eight representative plant species to show the evolution of GRAS genes in Planta. In addition, the gene structures and motifs of the sacred lotus GRAS proteins were characterized in detail. Comparative analysis identified 42 orthologous and 9 co-orthologous gene pairs between sacred lotus and Arabidopsis, and 35 orthologous and 22 co-orthologous gene pairs between sacred lotus and rice. Based on publically available RNA-seq data generated from leaf, petiole, rhizome and root, we found that most of the sacred lotus GRAS genes exhibited a tissue-specific expression pattern. Eight of the ten PAT1-clade GRAS genes, particularly NnuGRAS-05, NnuGRAS-10 and NnuGRAS-25, were preferentially expressed in rhizome and root. In summary, this is the first in silico analysis of the GRAS gene family in sacred lotus, which will provide valuable information for further molecular and biological analyses of this important gene family.
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