Evidence map›Paper›PMID 27635260›Full record

ArticleInternational journal of proteomics2016

S-Nitrosylation Proteome Profile of Peripheral Blood Mononuclear Cells in Human Heart Failure.

Sue-Jie Koo, Heidi M Spratt, Kizhake V Soman, Susan Stafford, Shivali Gupta, John R Petersen, Maria P Zago, Muge N Kuyumcu-Martinez, Allan R Brasier, John E Wiktorowicz and 1 more

Open access · hybridAbstract read
In one paragraph

Article in International journal of proteomics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Dysfunctional network of hub genes in hypertrophic cardiomyopathy patients.American journal of translational research · 2022
    Article
  6. Article
  7. Unlocking the Value of White Blood Cells for Heart Failure Diagnosis.Journal of cardiovascular translational research · 2021
    Review
  8. Genes of the cGMP-PKG-CaBiochimica et biophysica acta. Molecular basis of disease · 2020
    Article
  9. Potential Role of Antioxidants as Adjunctive Therapy in Chagas Disease.Oxidative medicine and cellular longevity · 2020
    Review
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Sue-Jie KooDepartment of Pathology, University of Texas Medical Branch (UTMB), Galveston, TX 77555, USA.ORCID 0000-0002-3305-9952
Heidi M SprattDepartment Preventive Medicine and Community Health, UTMB, Galveston, TX 77555, USA; Institute for Translational Sciences, UTMB, Galveston, TX 77555, USA.
Kizhake V SomanDepartment of Biochemistry and Molecular Biology, Sealy Center of Molecular Medicine, UTMB, Galveston TX 77555, USA.ORCID 0000-0002-2578-7028
Susan StaffordDepartment of Biochemistry and Molecular Biology, Sealy Center of Molecular Medicine, UTMB, Galveston TX 77555, USA.ORCID 0000-0002-5648-6981
Shivali GuptaDepartment of Microbiology and Immunology, UTMB, Galveston, TX 77555, USA.
John R PetersenDepartment of Pathology, University of Texas Medical Branch (UTMB), Galveston, TX 77555, USA.
Maria P ZagoInstituto de Patología Experimental, CONICET-UNSa, 4400 Salta, Argentina.ORCID 0000-0002-5928-0508
Muge N Kuyumcu-MartinezDepartment of Biochemistry and Molecular Biology, Sealy Center of Molecular Medicine, UTMB, Galveston TX 77555, USA.
Allan R BrasierInstitute for Translational Sciences, UTMB, Galveston, TX 77555, USA; Department of Internal Medicine-Endocrinology, UTMB, Galveston, TX 77555, USA.ORCID 0000-0002-5012-4090
John E WiktorowiczInstitute for Translational Sciences, UTMB, Galveston, TX 77555, USA; Department of Biochemistry and Molecular Biology, Sealy Center of Molecular Medicine, UTMB, Galveston TX 77555, USA; Institute for Human Infections and Immunity, UTMB, Galveston, TX 77555, USA.ORCID 0000-0002-9269-2336
Nisha Jain GargDepartment of Pathology, University of Texas Medical Branch (UTMB), Galveston, TX 77555, USA; Department of Microbiology and Immunology, UTMB, Galveston, TX 77555, USA; Institute for Human Infections and Immunity, UTMB, Galveston, TX 77555, USA.ORCID 0000-0002-3453-2369
John Sealy Hospital · USThe University of Texas Medical Branch at Galveston · USConsejo Nacional de Investigaciones Científicas y Técnicas · AR

Funding

Pathogenesis of Oxidative Stress in Chagasic MyocarditisR01AI054578 · NIAID · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI GARG, NISHA JAIN · 2005 to 2016
$3.3M
Oxidative Response Networks in Chagasic CardiomyopathyR01HL094802 · NHLBI · UNIVERSITY OF TEXAS MED BR GALVESTON · PI GARG, NISHA JAIN · 2009 to 2013
$1.5M
STUDENTS IN HEALTH PROFESSIONAL SCHOOLST35AI007227 · NIAID · CORNELL UNIVERSITY ITHACA · PI PARKER, JOHN S, VAN DE WALLE, GERLINDE R. · 1985 to 2023
$1.2M
Human serum carbonyl proteome in cardiovascular diseasesR21HL088230 · NHLBI · UNIVERSITY OF TEXAS MED BR GALVESTON · PI GARG, NISHA JAIN · 2008 to 2010
$642k
Mitochondrial Biomarkers of Cardiomyopathy and Cure in Chagas DiseaseR21AI107227 · NIAID · UNIVERSITY OF TEXAS MED BR GALVESTON · PI GARG, NISHA JAIN · 2013 to 2014
$411k
NHLBI NIH HHS R01 HL094802NHLBI NIH HHS R21 HL088230NIAID NIH HHS HHSN272200800048CNIAID NIH HHS R01 AI054578NIAID NIH HHS R21 AI107227NIAID NIH HHS T35 AI007227
6 · The paper itself

Abstract

Nitric oxide (NO) protects the heart against ischemic injury; however, NO- and superoxide-dependent S-nitrosylation (S-NO) of cysteines can affect function of target proteins and play a role in disease outcome. We employed 2D-GE with thiol-labeling FL-maleimide dye and MALDI-TOF MS/MS to capture the quantitative changes in abundance and S-NO proteome of HF patients (versus healthy controls, n = 30/group). We identified 93 differentially abundant (59-increased/34-decreased) and 111 S-NO-modified (63-increased/48-decreased) protein spots, respectively, in HF subjects (versus controls, fold-change | ≥1.5|, p ≤ 0.05). Ingenuity pathway analysis of proteome datasets suggested that the pathways involved in phagocytes' migration, free radical production, and cell death were activated and fatty acid metabolism was decreased in HF subjects. Multivariate adaptive regression splines modeling of datasets identified a panel of proteins that will provide >90% prediction success in classifying HF subjects. Proteomic profiling identified ATP-synthase, thrombospondin-1 (THBS1), and vinculin (VCL) as top differentially abundant and S-NO-modified proteins, and these proteins were verified by Western blotting and ELISA in different set of HF subjects. We conclude that differential abundance and S-NO modification of proteins serve as a mechanism in regulating cell viability and free radical production, and THBS1 and VCL evaluation will potentially be useful in the prediction of heart failure.

Identifiers

PMID27635260
PMCPMC5007369
OpenAlexW2516247597

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.