Evidence map›Paper›PMID 27635055›Full record

ArticleGenome biology and evolution2016

Complete Genome Sequence of the MRSA Isolate HC1335 from ST239 Lineage Displaying a Truncated AgrC Histidine Kinase Receptor.

Ana M N Botelho, Maiana O C Costa, Cristiana O Beltrame, Fabienne A Ferreira, Nicholas C B Lima, Bruno S S Costa, Guilherme L de Morais, Rangel C Souza, Luiz G P Almeida, Ana T R Vasconcelos and 2 more

Open access · goldAbstract read
In one paragraph

Article in Genome biology and evolution, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Local Diversification of Methicillin- ResistantFrontiers in microbiology · 2019
    Article
  4. Comparative Secretome Analyses of Human and ZoonoticMolecular & cellular proteomics : MCP · 2018
    Article
  5. TheFrontiers in microbiology · 2018
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Ana M N BotelhoLaboratório de Biologia Molecular de Bactérias, Instituto de Microbiologia Paulo de Góes, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Brazil.
Maiana O C CostaLaboratório Nacional de Computação Científica, Petrópolis, Brazil.
Cristiana O BeltrameLaboratório de Biologia Molecular de Bactérias, Instituto de Microbiologia Paulo de Góes, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Brazil.
Fabienne A FerreiraLaboratório de Biologia Molecular de Bactérias, Instituto de Microbiologia Paulo de Góes, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Brazil.
Nicholas C B LimaLaboratório Nacional de Computação Científica, Petrópolis, Brazil.
Bruno S S CostaLaboratório de Biologia Molecular de Bactérias, Instituto de Microbiologia Paulo de Góes, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Brazil.
Guilherme L de MoraisLaboratório Nacional de Computação Científica, Petrópolis, Brazil.
Rangel C SouzaLaboratório Nacional de Computação Científica, Petrópolis, Brazil.
Luiz G P AlmeidaLaboratório Nacional de Computação Científica, Petrópolis, Brazil.
Ana T R VasconcelosLaboratório Nacional de Computação Científica, Petrópolis, Brazil.
Marisa F NicolásLaboratório Nacional de Computação Científica, Petrópolis, Brazil.
Agnes M S FigueiredoLaboratório de Biologia Molecular de Bactérias, Instituto de Microbiologia Paulo de Góes, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Brazil agnes@micro.ufrj.br.
Laboratório Nacional de Computação Científica · BRUniversidade Federal do Rio de Janeiro · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Methicillin-resistant Staphylococcus aureus (MRSA) is still one of the most important hospital pathogen globally. The multiresistant isolates of the ST239-SCCmecIII lineage are spread over large geographic regions, colonizing and infecting hospital patients in virtually all continents. The balance between fitness (adaptability) and virulence potential is likely to represent an important issue in the clonal shift dynamics leading the success of some specific MRSA clones over another. The accessory gene regulator (agr) is the master quorum sensing system of staphylococci playing a role in the global regulation of key virulence factors. Consequently, agr inactivation in S. aureus may represent a significant mechanism of genetic variability in the adaptation of this healthcare-associated pathogen. We report here the complete genome sequence of the methicillin-resistant S. aureus, isolate HC1335, a variant of the ST239 lineage, which presents a natural insertion of an IS256 transposase element in the agrC gene encoding AgrC histidine kinase receptor.

Indexed as

Genome, BacterialMutagenesis, InsertionalBacterial ProteinsDNA Transposable ElementsGenetic FitnessGenetic VariationMethicillin-Resistant Staphylococcus aureusProtein KinasesAgrC protein, StaphylococcusBacterial ProteinsDNA Transposable ElementsProtein KinasesagrC dysfunctioncomplete genome sequenceIS256 insertionmethicillin-resistant Staphylococcus aureusST239 lineage

Identifiers

PMID27635055
PMCPMC5174738
OpenAlexW2520446421

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.