Evidence map›Paper›PMID 27634995›Full record

ArticleGenome announcements2016

Draft Genome Sequence of Salmonella enterica subsp. enterica Serovar Bardo Strain CRJJGF_00099 (Phylum Gammaproteobacteria).

Sushim K Gupta, Elizabeth A McMillan, Charlene R Jackson, Prerak T Desai, Steffen Porwollik, Michael McClelland, Lari M Hiott, Shaheen B Humayoun, Jonathan G Frye

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Genome announcements, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Frontiers in microbiology · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Sushim K GuptaBacterial Epidemiology and Antimicrobial Resistance Research Unit, USDA-ARS, Athens, Georgia, USA.
Elizabeth A McMillanBacterial Epidemiology and Antimicrobial Resistance Research Unit, USDA-ARS, Athens, Georgia, USA Department of Microbiology, University of Georgia, Athens, Georgia, USA.
Charlene R JacksonBacterial Epidemiology and Antimicrobial Resistance Research Unit, USDA-ARS, Athens, Georgia, USA.
Prerak T DesaiDepartment of Microbiology and Molecular Genetics, University of California, Irvine, Irvine, California, USA.
Steffen PorwollikDepartment of Microbiology and Molecular Genetics, University of California, Irvine, Irvine, California, USA.
Michael McClellandDepartment of Microbiology and Molecular Genetics, University of California, Irvine, Irvine, California, USA.
Lari M HiottBacterial Epidemiology and Antimicrobial Resistance Research Unit, USDA-ARS, Athens, Georgia, USA.
Shaheen B HumayounBacterial Epidemiology and Antimicrobial Resistance Research Unit, USDA-ARS, Athens, Georgia, USA.
Jonathan G FryeBacterial Epidemiology and Antimicrobial Resistance Research Unit, USDA-ARS, Athens, Georgia, USA Jonathan.Frye@ars.usda.gov.

Funding

NITRIC OXIDE CYTOTOXICITY IN SALMONELLOSISR01AI039557 · NIAID · UNIVERSITY OF WASHINGTON · PI FANG, FERRIC C · 1997 to 2012
$4.1M
Comparative Genomics in the EnterobateriaceaeR01AI052237 · NIAID · WASHINGTON UNIVERSITY · PI WEINSTOCK, GEORGE M · 2002 to 2009
$4.1M
Salmonella polymicrobial interactionsR01AI073971 · NIAID · OHIO STATE UNIVERSITY · PI AHMER, BRIAN M · 2008 to 2012
$2.8M
Identification of Salmonella Genes Important for Systemic ColonizationR01AI083646 · NIAID · TEXAS A&M UNIVERSITY HEALTH SCIENCE CTR · PI ANDREWS-POLYMENIS, HELENE L · 2009 to 2012
$1.6M
Salmonella Genes Associated with Colonization of Specific HostsR01AI075093 · NIAID · VACCINE RESEARCH INSTITUTE OF SAN DIEGO · PI MCCLELLAND, MICHAEL · 2009 to 2010
$928k
Identification of Salmonella Genes Involved in Persistence in the Murine IntestinR56AI077645 · NIAID · TEXAS A&M UNIVERSITY HEALTH SCIENCE CTR · PI ANDREWS-POLYMENIS, HELENE L · 2009 to 2009
$423k
NIAID NIH HHS R01 AI039557NIAID NIH HHS R01 AI052237NIAID NIH HHS R01 AI073971NIAID NIH HHS R01 AI075093NIAID NIH HHS R01 AI083646NIAID NIH HHS R56 AI077645
6 · The paper itself

Abstract

Here, we report a 4.87-Mbp draft genome sequence of the multidrug-resistant (MDR) Salmonella enterica subsp. enterica serovar Bardo strain CRJJGF_00099, isolated from dairy cattle in 2005.

Identifiers

PMID27634995
PMCPMC5026435

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.