Evidence map›Paper›PMID 27634042›Full record

ArticleThe Journal of biological chemistry2016

Disruption of Macrodomain Protein SCO6735 Increases Antibiotic Production in Streptomyces coelicolor.

Jasna Lalić, Melanija Posavec Marjanović, Luca Palazzo, Dragutin Perina, Igor Sabljić, Roko Žaja, Thomas Colby, Bruna Pleše, Mirna Halasz, Gytis Jankevicius and 7 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.6field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 22 citations in OpenAlex.

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  8. Computational and structural biotechnology journal · 2022
    Article
  9. ADP-ribosylation systems in bacteria and viruses.Computational and structural biotechnology journal · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 4 institutions in 3 countries.

Jasna LalićFrom the Division of Molecular Biology.
Melanija Posavec MarjanovićFrom the Division of Molecular Biology.
Luca Palazzothe Sir William Dunn School of Pathology, University of Oxford, Oxford OX1 3RE, United Kingdom.
Dragutin PerinaFrom the Division of Molecular Biology.
Igor Sabljićthe Division of Physical Chemistry, and.
Roko Žajathe Sir William Dunn School of Pathology, University of Oxford, Oxford OX1 3RE, United Kingdom.
Thomas Colbythe Max Planck Institute for Biology of Ageing, D-50931 Cologne, Germany, and.
Bruna PlešeFrom the Division of Molecular Biology.
Mirna HalaszFrom the Division of Molecular Biology.
Gytis Jankeviciusthe Sir William Dunn School of Pathology, University of Oxford, Oxford OX1 3RE, United Kingdom.
Giselda Buccathe School of Pharmacy and Biomolecular Sciences, University of Brighton, Huxley Building, Moulsecoomb, Brighton BN2 4GJ, United Kingdom.
Marijan Ahelthe Division for Marine and Environmental Research, Ruđer Bošković Institute, Zagreb 10002, Croatia.
Ivan Matićthe Max Planck Institute for Biology of Ageing, D-50931 Cologne, Germany, and.
Helena ĆetkovićFrom the Division of Molecular Biology.
Marija Luićthe Division of Physical Chemistry, and.
Andreja MikočFrom the Division of Molecular Biology, mikoc@irb.hr.
Ivan Ahelthe Sir William Dunn School of Pathology, University of Oxford, Oxford OX1 3RE, United Kingdom, ivan.ahel@path.ox.ac.uk.
University of Oxford · GBMax Planck Institute for Biology of Ageing · DERudjer Boskovic Institute · HRUniversity of Brighton · GB

Funding

Cancer Research UK 22284Cancer Research UK C35050/A22284European Research Council 281739Wellcome Trust 101794
6 · The paper itself

Abstract

ADP-ribosylation is a post-translational modification that can alter the physical and chemical properties of target proteins and that controls many important cellular processes. Macrodomains are evolutionarily conserved structural domains that bind ADP-ribose derivatives and are found in proteins with diverse cellular functions. Some proteins from the macrodomain family can hydrolyze ADP-ribosylated substrates and therefore reverse this post-translational modification. Bacteria and Streptomyces, in particular, are known to utilize protein ADP-ribosylation, yet very little is known about their enzymes that synthesize and remove this modification. We have determined the crystal structure and characterized, both biochemically and functionally, the macrodomain protein SCO6735 from Streptomyces coelicolor This protein is a member of an uncharacterized subfamily of macrodomain proteins. Its crystal structure revealed a highly conserved macrodomain fold. We showed that SCO6735 possesses the ability to hydrolyze PARP-dependent protein ADP-ribosylation. Furthermore, we showed that expression of this protein is induced upon DNA damage and that deletion of this protein in S. coelicolor increases antibiotic production. Our results provide the first insights into the molecular basis of its action and impact on Streptomyces metabolism.

Indexed as

Adenosine Diphosphate RiboseAnti-Bacterial AgentsBacterial ProteinsDNA DamageProtein Processing, Post-TranslationalStreptomyces coelicolorAdenosine Diphosphate RiboseAnti-Bacterial AgentsBacterial ProteinsADP-riboseADP-ribosylationantibioticsDNA damageenzyme mechanismmicrobiologynicotinamide adenine dinucleotide (NAD)PARPpost-translational modification (PTM)Streptomyces

Identifiers

PMID27634042
PMCPMC5087735
OpenAlexW2519096388

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.