Evidence map›Paper›PMID 27632565›Full record

ArticleVirology2016

Changes in adaptation of H5N2 highly pathogenic avian influenza H5 clade 2.3.4.4 viruses in chickens and mallards.

Eric DeJesus, Mar Costa-Hurtado, Diane Smith, Dong-Hun Lee, Erica Spackman, Darrell R Kapczynski, Mia Kim Torchetti, Mary L Killian, David L Suarez, David E Swayne and 1 more

Open access · greenAbstract read
In one paragraph

Article in Virology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
6.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 75 citations in OpenAlex.

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  14. Concurrent loss of ciliary genesRoyal Society open science · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Eric DeJesusExotic and Emerging Avian Viral Diseases Research Unit, Southeast Poultry Research Laboratory, U.S. National Poultry Research Center, Agricultural Research Service, U.S. Department of Agriculture, Athens, GA, USA. Electronic address: eric.dejesus@ars.usda.gov.
Mar Costa-HurtadoExotic and Emerging Avian Viral Diseases Research Unit, Southeast Poultry Research Laboratory, U.S. National Poultry Research Center, Agricultural Research Service, U.S. Department of Agriculture, Athens, GA, USA. Electronic address: mar.costa-hurtado@umontreal.ca.
Diane SmithExotic and Emerging Avian Viral Diseases Research Unit, Southeast Poultry Research Laboratory, U.S. National Poultry Research Center, Agricultural Research Service, U.S. Department of Agriculture, Athens, GA, USA. Electronic address: diane.smith@ars.usda.gov.
Dong-Hun LeeExotic and Emerging Avian Viral Diseases Research Unit, Southeast Poultry Research Laboratory, U.S. National Poultry Research Center, Agricultural Research Service, U.S. Department of Agriculture, Athens, GA, USA. Electronic address: donghun.lee@ars.usda.gov.
Erica SpackmanExotic and Emerging Avian Viral Diseases Research Unit, Southeast Poultry Research Laboratory, U.S. National Poultry Research Center, Agricultural Research Service, U.S. Department of Agriculture, Athens, GA, USA. Electronic address: erica.spackman@ars.usda.gov.
Darrell R KapczynskiExotic and Emerging Avian Viral Diseases Research Unit, Southeast Poultry Research Laboratory, U.S. National Poultry Research Center, Agricultural Research Service, U.S. Department of Agriculture, Athens, GA, USA. Electronic address: darrell.kapczynski@ars.usda.gov.
Mia Kim TorchettiNational Veterinary Services Laboratories, Veterinary Services, U.S. Department of Agriculture, Ames, IA, USA. Electronic address: mia.kim.torchetti@aphis.usda.gov.
Mary L KillianNational Veterinary Services Laboratories, Veterinary Services, U.S. Department of Agriculture, Ames, IA, USA. Electronic address: mary.l.killian@aphis.usda.gov.
David L SuarezExotic and Emerging Avian Viral Diseases Research Unit, Southeast Poultry Research Laboratory, U.S. National Poultry Research Center, Agricultural Research Service, U.S. Department of Agriculture, Athens, GA, USA. Electronic address: david.suarez@ars.usda.gov.
David E SwayneExotic and Emerging Avian Viral Diseases Research Unit, Southeast Poultry Research Laboratory, U.S. National Poultry Research Center, Agricultural Research Service, U.S. Department of Agriculture, Athens, GA, USA. Electronic address: david.swayne@ars.usda.gov.
Mary J Pantin-JackwoodExotic and Emerging Avian Viral Diseases Research Unit, Southeast Poultry Research Laboratory, U.S. National Poultry Research Center, Agricultural Research Service, U.S. Department of Agriculture, Athens, GA, USA. Electronic address: mary.pantin-jackwood@ars.usda.gov.
Agricultural Research Service · USLife Services (United States) · US

Funding

NIAID NIH HHS HHSN272201400008C
6 · The paper itself

Abstract

H5N2 highly pathogenic avian influenza (HPAI) viruses caused a severe poultry outbreak in the United States (U.S.) during 2015. In order to examine changes in adaptation of this viral lineage, the infectivity, pathogenicity and transmission of poultry H5N2 viruses were investigated in chickens and mallards in comparison to the wild duck 2014 U.S. index H5N2 virus. The four poultry isolates examined had a lower mean bird infectious dose than the index virus but still transmitted poorly to direct contacts. In mallards, two of the H5N2 poultry isolates had similar high infectivity and transmissibility as the index H5N2 virus, the H5N8 U.S. index virus, and a 2005 H5N1 clade 2.2 virus. Mortality occurred with the H5N1 virus and, interestingly, with one of two poultry H5N2 isolates. Increased virus adaptation to chickens was observed with the poultry H5N2 viruses; however these viruses retained high adaptation to mallards but pathogenicity was differently affected.

Indexed as

Adaptation, BiologicalChickensDucksAnimalsGenetic VariationInfluenza A Virus, H5N2 SubtypeInfluenza in BirdsRNA, ViralSequence Analysis, DNAViral LoadVirus SheddingRNA, ViralAdaptationChickensH5N1H5N2H5N8Highly pathogenic avian influenza virusInfectivityMallardsPathogenicityTransmission

Identifiers

PMID27632565
PMCPMC5102764
OpenAlexW2520903201

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.