Evidence map›Paper›PMID 27632030›Full record

ArticleCurrent genetics2017

The expression of many chemoreceptor genes depends on the cognate chemoeffector as well as on the growth medium and phase.

Diana López-Farfán, José Antonio Reyes-Darias, Tino Krell

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Article in Current genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Role of a single MCP in evolutionary adaptation ofApplied and environmental microbiology · 2025
    Article
  3. Bacterial sensor evolved by decreasing complexity.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  4. AnApplied and environmental microbiology · 2024
    Article
  5. Article
  6. Review
  7. Article
  8. Oxalic Acid FromFrontiers in microbiology · 2019
    Article
  9. Article
  10. Article
  11. Sensory Repertoire of Bacterial Chemoreceptors.Microbiology and molecular biology reviews : MMBR · 2017
    Review
  12. Identification of a Chemoreceptor inFrontiers in microbiology · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Diana López-FarfánDepartment of Environmental Protection, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas, C/Prof. Albareda, 1, 18008, Granada, Spain.
José Antonio Reyes-DariasDepartment of Environmental Protection, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas, C/Prof. Albareda, 1, 18008, Granada, Spain.
Tino KrellDepartment of Environmental Protection, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas, C/Prof. Albareda, 1, 18008, Granada, Spain. tino.krell@eez.csic.es.ORCID http://orcid.org/0000-0002-9040-3166
Consejo Superior de Investigaciones Científicas · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chemoreceptor-based signaling is a major bacterial signal transduction mechanism. Escherichia coli, the traditional model, has five chemoreceptors. Recent genome analyses have shown that many bacteria have a much higher number of chemoreceptors. Pseudomonas putida KT2440 is an alternative model that has 27 chemoreceptors and the cognate chemoeffector is known for many of them. Here, we address the question whether and which factors modulate chemoreceptor gene expression. We report reverse transcriptase quantitative PCR measurements of all KT2440 chemoreceptor genes. Transcript levels of individual chemoreceptors differed largely, namely up to 174-fold between the most and least abundant. The cognate chemoeffectors had three different effects on the expression of their chemoreceptor genes. In some cases, the respective chemoeffectors, shown previously to be C- and/or N-sources, induced the expression. In contrast, for the two inorganic phosphate sensing chemoreceptors, the chemoeffector caused dramatic reduction in expression. For four other receptors, including the three TCA cycle intermediate sensing receptors, the chemoeffector did not cause any significant alterations. In addition, a significant number of receptors were induced in minimal growth medium and in the stationary phase. We show here that environmental cues determine largely chemoreceptor expression. This work will serve as reference for analogous studies in other bacteria.

Indexed as

Genome, BacterialBacterial ProteinsChemotaxisEscherichia coliGene Expression Regulation, BacterialPseudomonas putidaSignal TransductionBacterial ProteinsChemoreceptorChemosensory pathwayChemotaxisGene expressionPseudomonas

Identifiers

PMID27632030
OpenAlexW2513644827

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.