Evidence map›Paper›PMID 27632006›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2016

Activity Detection of GalNAc Transferases by Protein-Based Fluorescence Sensors In Vivo.

Lina Song, Collin Bachert, Adam D Linstedt

Abstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Lina SongDepartment of Biological Sciences, Carnegie Mellon University, Pittsburgh, PA, 15213, USA.
Collin BachertDepartment of Biological Sciences, Carnegie Mellon University, Pittsburgh, PA, 15213, USA.
Adam D LinstedtDepartment of Biological Sciences, Carnegie Mellon University, Pittsburgh, PA, 15213, USA. linstedt@cmu.edu.

Funding

RETRIEVAL PATHWAY IN GOLGI STACK TARGETINGR01GM056779 · NIGMS · CARNEGIE-MELLON UNIVERSITY · PI LINSTEDT, ADAM D · 1998 to 2015
$4.1M
DRUG-LIKE MODULATORS TARGETING O-GLYCOSYLATION BY GalNAc TRANSFERASE-2/3R21DE026714 · NIDCR · CARNEGIE-MELLON UNIVERSITY · PI LINSTEDT, ADAM D · 2016 to 2017
$584k
NIDCR NIH HHS R21 DE026714NIGMS NIH HHS R01 GM056779
6 · The paper itself

Abstract

Mucin-type O-glycosylation occurring in the Golgi apparatus is an important protein posttranslational modification initiated by up to 20 GalNAc-transferase isozymes with largely distinct substrate specificities. Regulation of this enzyme family affects a vast array of proteins transiting the secretory pathway and misregulation causes human diseases. Here we describe the use of protein-based fluorescence sensors that traffic in the secretory pathway to monitor GalNAc-transferase activity in living cells. The sensors can either be "pan" or isozyme specific.

Indexed as

Biosensing TechniquesHEK293 CellsHumansMicroscopy, FluorescenceN-AcetylgalactosaminyltransferasesPolypeptide N-acetylgalactosaminyltransferaseN-AcetylgalactosaminyltransferasesPolypeptide N-acetylgalactosaminyltransferaseFluorescence-activating proteinFluorescent biosensorGalNAc transferaseO-glycosylation

Identifiers

PMID27632006
PMCPMC5549557

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.