Evidence map›Paper›PMID 27631542›Full record

ArticleJAMA ophthalmology2016

Novel Phagocytosis-Resistant Extended-Spectrum β-Lactamase-Producing Escherichia coli From Keratitis.

Daria Van Tyne, Joseph B Ciolino, Jay Wang, Marlene L Durand, Michael S Gilmore

Open access · bronzeAbstract readCase Reports
In one paragraph

Article in JAMA ophthalmology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
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  7. Phagocytosis is a primary determinant of pulmonary clearance of clinicalFrontiers in cellular and infection microbiology · 2023
    Article
  8. Article
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  12. Article
  13. Variant O89 O-Antigen ofFrontiers in microbiology · 2018
    Article
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Daria Van TyneDepartment of Ophthalmology, Harvard Medical School, Massachusetts Eye and Ear Infirmary, Boston, Massachusetts2Department of Microbiology and Immunobiology, Harvard Medical School, Boston, Massachusetts.
Joseph B CiolinoDepartment of Ophthalmology, Harvard Medical School, Massachusetts Eye and Ear Infirmary, Boston, Massachusetts.
Jay WangDepartment of Ophthalmology, Harvard Medical School, Massachusetts Eye and Ear Infirmary, Boston, Massachusetts.
Marlene L DurandDepartment of Ophthalmology, Harvard Medical School, Massachusetts Eye and Ear Infirmary, Boston, Massachusetts3Department of Medicine, Massachusetts General Hospital, Boston, Massachusetts4Infectious Disease Service, Massachusetts Eye and Ear Infirmary, Harvard Medical School, Boston, Massachusetts.
Michael S GilmoreDepartment of Ophthalmology, Harvard Medical School, Massachusetts Eye and Ear Infirmary, Boston, Massachusetts2Department of Microbiology and Immunobiology, Harvard Medical School, Boston, Massachusetts.
Massachusetts Eye and Ear Infirmary · USHarvard University · USMassachusetts General Hospital · US

Funding

Technical Mother Machine CoreP01AI083214 · NIAID · SCHEPENS EYE RESEARCH INSTITUTE · PI Michael S Gilmore · 2009 to 2026
$39.4M
Molecular Basis for Ocular Surface Tropism in ConjunctivitisR01EY024285 · NEI · MASSACHUSETTS EYE AND EAR INFIRMARY · PI GILMORE, MICHAEL S · 2014 to 2017
$1.6M
Bacterial Evasion of Innate Defenses at the Ocular SurfaceR00EY028222 · NEI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI VAN TYNE, DARIA N · 2018 to 2020
$728k
Regulation of Expression and Immunity in the Enterococcus Faecalis CytolysinF32AI109855 · NIAID · MASSACHUSETTS EYE AND EAR INFIRMARY · PI VAN TYNE, DARIA N · 2014 to 2016
$108k
NEI NIH HHS R00 EY028222NEI NIH HHS R01 EY024285NIAID NIH HHS F32 AI109855NIAID NIH HHS P01 AI083214
6 · The paper itself

Abstract

importanceExtended-spectrum β-lactamase (ESBL)-producing Escherichia coli are highly antibiotic resistant, and primary ocular infection by ESBL E coli has rarely been reported. A novel mutation conferring phagocytosis resistance would position a strain well to infect the cornea. OBSERVATIONS: A woman with recurrent keratitis presented with a corneal ulcer, which was culture positive for ESBL E coli. Resistant to nearly all other antimicrobials, the infection was treated with amikacin and polymyxin B-trimethoprim, and the ulcer resolved over 3 weeks. Analysis of the E coli genome showed it to belong to multilocus sequence type 131 (ST131). This isolate was found to possess a novel deletion in yrfF, an essential regulator of bacterial capsule synthesis. Disruption of yrfF, which confers mucoidy and increased virulence, has not been previously observed in ESBL E coli from any infection site. This novel variant was experimentally proven to cause the mucoid phenotype, and corresponding resistance to phagocytic killing. CONCLUSIONS AND RELEVANCE: Increased resistance to immune clearance in an ESBL E coli lineage already known for its virulence is an unsettling development. This phenotype, which likely positioned it as an unusual cause of corneal ulcer, can be easily recognized in the laboratory, which should help limit its spread.

Indexed as

Drug Resistance, Multiple, BacterialAnti-Bacterial Agentsbeta-LactamasesEscherichia coliEscherichia coli InfectionsEye Infections, BacterialFemaleHumansKeratitisMicrobial Sensitivity TestsMiddle AgedPhagocytosisVirulenceAnti-Bacterial Agentsbeta-Lactamases

Identifiers

PMID27631542
PMCPMC5106311
OpenAlexW2519037255

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.