Evidence map›Paper›PMID 27630658›Full record

ArticleFrontiers in plant science2016

Genetic Distinctiveness of Rye In situ Accessions from Portugal Unveils a New Hotspot of Unexplored Genetic Resources.

Filipa Monteiro, Patrícia Vidigal, André B Barros, Ana Monteiro, Hugo R Oliveira, Wanda Viegas

Abstract read
In one paragraph

Article in Frontiers in plant science, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
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  3. Frontiers in plant science · 2025
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  8. European maize landraces made accessible for plant breeding and genome-based studies.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Filipa MonteiroLinking Landscape, Environment, Agriculture and Food, Instituto Superior de Agronomia, Universidade de Lisboa Lisboa, Portugal.
Patrícia VidigalLinking Landscape, Environment, Agriculture and Food, Instituto Superior de Agronomia, Universidade de Lisboa Lisboa, Portugal.
André B BarrosColégio F3 Food, Farming and Forestry, Universidade de Lisboa Lisboa, Portugal.
Ana MonteiroLinking Landscape, Environment, Agriculture and Food, Instituto Superior de Agronomia, Universidade de Lisboa Lisboa, Portugal.
Hugo R OliveiraPlant Biology/Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do PortoPorto, Portugal; Faculty of Life Sciences, Manchester Institute of Biotechnology, University of ManchesterManchester, UK.
Wanda ViegasLinking Landscape, Environment, Agriculture and Food, Instituto Superior de Agronomia, Universidade de Lisboa Lisboa, Portugal.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rye (Secale cereale L.) is a cereal crop of major importance in many parts of Europe and rye breeders are presently very concerned with the restrict pool of rye genetic resources available. Such narrowing of rye genetic diversity results from the presence of "Petkus" pool in most modern rye varieties as well as "Petkus" × "Carsten" heterotic pool in hybrid rye breeding programs. Previous studies on rye's genetic diversity revealed moreover a common genetic background on landraces (ex situ) and cultivars, regardless of breeding level or geographical origin. Thus evaluation of in situ populations is of utmost importance to unveil "on farm" diversity, which is largely undervalued. Here, we perform the first comprehensive assessment of rye's genetic diversity and population structuring using cultivars, ex situ landraces along a comprehensive sampling of in situ accessions from Portugal, through a molecular-directed analysis using SSRs markers. Rye genetic diversity and population structure analysis does not present any geographical trend but disclosed marked differences between genetic backgrounds of in situ accessions and those of cultivars/ex situ collections. Such genetic distinctiveness of in situ accessions highlights their unexplored potential as new genetic resources, which can be used to boost rye breeding strategies and the production of new varieties. Overall, our study successfully demonstrates the high prospective impact of comparing genetic diversity and structure of cultivars, ex situ, and in situ samples in ascertaining the status of plant genetic resources (PGR).

Indexed as

genetic poolin situ conservationmicrosatellitepopulation structureSecale cereale

Identifiers

PMID27630658
PMCPMC5006150

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.