Evidence map›Paper›PMID 27625995›Full record

ArticleFrontiers in cellular and infection microbiology2016

Genetic Relatedness and Novel Sequence Types of Non-O157 Shiga Toxin-Producing Escherichia coli Strains Isolated in Argentina.

Jimena S Cadona, Ana V Bustamante, Juliana González, A Mariel Sanso

Open access · goldAbstract read
In one paragraph

Article in Frontiers in cellular and infection microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 16 citations in OpenAlex.

  1. Diversity of Non-O157 Shiga Toxin-ProducingAnimals : an open access journal from MDPI · 2021
    Article
  2. Genomic Epidemiology of Shiga Toxin-ProducingAnimals : an open access journal from MDPI · 2021
    Article
  3. Article
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  8. Multi-Year Persistence of VerotoxigenicFrontiers in microbiology · 2018
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Jimena S CadonaLaboratorio de Inmunoquímica y Biotecnología, Facultad de Ciencias Veterinarias, Centro de Investigación Veterinaria de Tandil, Consejo Nacional de Investigaciones Científicas y Técnicas, Comisión de Investigaciones Científicas, Universidad Nacional del Centro de la Provincia de Buenos Aires Tandil, Argentina.
Ana V BustamanteLaboratorio de Inmunoquímica y Biotecnología, Facultad de Ciencias Veterinarias, Centro de Investigación Veterinaria de Tandil, Consejo Nacional de Investigaciones Científicas y Técnicas, Comisión de Investigaciones Científicas, Universidad Nacional del Centro de la Provincia de Buenos Aires Tandil, Argentina.
Juliana GonzálezLaboratorio de Inmunoquímica y Biotecnología, Facultad de Ciencias Veterinarias, Centro de Investigación Veterinaria de Tandil, Consejo Nacional de Investigaciones Científicas y Técnicas, Comisión de Investigaciones Científicas, Universidad Nacional del Centro de la Provincia de Buenos Aires Tandil, Argentina.
A Mariel SansoLaboratorio de Inmunoquímica y Biotecnología, Facultad de Ciencias Veterinarias, Centro de Investigación Veterinaria de Tandil, Consejo Nacional de Investigaciones Científicas y Técnicas, Comisión de Investigaciones Científicas, Universidad Nacional del Centro de la Provincia de Buenos Aires Tandil, Argentina.
Consejo Nacional de Investigaciones Científicas y Técnicas · ARUniversidad Nacional del Centro de la Provincia de Buenos Aires · AR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Shiga toxin-producing Escherichia coli (STEC) is a foodborne pathogen responsible for severe disease in humans such as hemolytic uremic syndrome (HUS) and cattle, the principal reservoir. Identification of the clones/lineages is important as several characteristics, among them propensity to cause disease varies with STEC phylogenetic origin. At present, we do not know what STEC clones, especially of non-O157:H7, are circulating in Argentina. To fill this knowledge gap we assessed the genetic diversity of STEC strains isolated in Argentina from various sources, mostly cattle and food, using multilocus sequence typing (MLST). Our objectives were to determine the phylogenetic relationships among strains and to compare them with strains from different geographic origins, especially with those from clinical human cases, in order to evaluate their potential health risk. A total of 59 STEC isolates from 41 serotypes were characterized by MLST. Analysis using EcMLST database identified 38 sequence types (ST), 17 (45%) of which were new STs detected in 18 serotypes. Fifteen out of 38 STs identified were grouped into 11 clonal groups (CGs) and, 23 not grouped in any of the defined CGs. Different STs were found in the same serotype. Results highlighted a high degree of phylogenetic heterogeneity among Argentinean strains and they showed that several cattle and food isolates belonged to the same STs that are commonly associated with clinical human cases in several geographical areas. STEC is a significant public health concern. Argentina has the highest incidence of HUS in the world and this study provides the first data about which STEC clones are circulating. Data showed that most of them might pose a serious zoonotic risk and this information is important for developing public health initiatives. However, the actual potential risk will be defined by the virulence profiles, which may differ among isolates belonging to the same ST.

Indexed as

Food MicrobiologyMultilocus Sequence TypingAnimalsArgentinaCattleCluster AnalysisEscherichia coli InfectionsHumansMolecular EpidemiologyPhylogenySerogroupShiga-Toxigenic Escherichia coliArgentinean clonesfood-borne pathogenMLSTnon-O157 Shiga toxin-producing Escherichia colizoonotic risk

Identifiers

PMID27625995
PMCPMC5003923
OpenAlexW2511265029

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.