Evidence map›Paper›PMID 27625022›Full record

ArticleDiabetes2016

Peripheral Blood Transcriptomic Signatures of Fasting Glucose and Insulin Concentrations.

Brian H Chen, Marie-France Hivert, Marjolein J Peters, Luke C Pilling, John D Hogan, Lisa M Pham, Lorna W Harries, Caroline S Fox, Stefania Bandinelli, Abbas Dehghan and 19 more

Open access · greenAbstract read
In one paragraph

Article in Diabetes, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 2 pooled it
1.8field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 2 syntheses or guidelines pooled it, 29 citations in OpenAlex.

  1. Genome-Wide Association Analysis of Pancreatic Beta-Cell Glucose Sensitivity.The Journal of clinical endocrinology and metabolism · 2021
    Pooled it
  2. Pooled it
  3. Article
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  7. Review
  8. Article
  9. Review
  10. Review
  11. Article
  12. Association of Genetic Variants inFrontiers in endocrinology · 2021
    Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

29 authors at 9 institutions in 5 countries.

Brian H ChenLongitudinal Studies Section, Translational Gerontology Branch, Intramural Research Program, National Institute on Aging, National Institutes of Health, Baltimore, MD.
Marie-France HivertDepartment of Population Medicine, Harvard Pilgrim Health Care Institute, Harvard Medical School, Boston, MA.
Marjolein J PetersDepartment of Internal Medicine, Erasmus University Medical Center Rotterdam, Rotterdam, the Netherlands.
Luke C PillingEpidemiology and Public Health Group, Institute of Biomedical and Clinical Sciences, University of Exeter Medical School, Exeter, U.K.
John D HoganProgram in Bioinformatics, Boston University, Boston, MA.
Lisa M PhamProgram in Bioinformatics, Boston University, Boston, MA.
Lorna W HarriesInstitute of Biomedical and Clinical Sciences, University of Exeter Medical School, Exeter, U.K.
Caroline S FoxFramingham Heart Study, National Heart, Lung, and Blood Institute, Framingham, MA.
Stefania BandinelliGeriatric Rehabilitation Unit, Azienda Sanitaria di Firenze, Florence, Italy.
Abbas DehghanDepartment of Epidemiology, Erasmus University Medical Center Rotterdam, Rotterdam, the Netherlands.
Dena G HernandezLaboratory of Neurogenetics, Intramural Research Program, National Institute on Aging, National Institutes of Health, Bethesda, MD.
Albert HofmanDepartment of Epidemiology, Erasmus University Medical Center Rotterdam, Rotterdam, the Netherlands.
Jaeyoung HongDepartment of Biostatistics, Boston University School of Public Health, Boston, MA.
Roby JoehanesFramingham Heart Study, National Heart, Lung, and Blood Institute, Framingham, MA.
Andrew D JohnsonFramingham Heart Study, National Heart, Lung, and Blood Institute, Framingham, MA.
Peter J MunsonMathematical and Statistical Computing Laboratory, Center for Information Technology, National Institutes of Health, Bethesda, MD.
Denis V RybinData Coordinating Center, Boston University, Boston, MA.
Andrew B SingletonLaboratory of Neurogenetics, Intramural Research Program, National Institute on Aging, National Institutes of Health, Bethesda, MD.
André G UitterlindenDepartment of Internal Medicine, Erasmus University Medical Center Rotterdam, Rotterdam, the Netherlands.
Saixia YingMathematical and Statistical Computing Laboratory, Center for Information Technology, National Institutes of Health, Bethesda, MD.
MAGIC Investigators
David MelzerEpidemiology and Public Health Group, Institute of Biomedical and Clinical Sciences, University of Exeter Medical School, Exeter, U.K.
Daniel LevyFramingham Heart Study, National Heart, Lung, and Blood Institute, Framingham, MA.
Joyce B J van MeursDepartment of Internal Medicine, Erasmus University Medical Center Rotterdam, Rotterdam, the Netherlands.
Luigi FerrucciLongitudinal Studies Section, Translational Gerontology Branch, Intramural Research Program, National Institute on Aging, National Institutes of Health, Baltimore, MD.
Jose C FlorezDiabetes Research Center, Department of Medicine, Massachusetts General Hospital, Boston, MA.
Josée DupuisFramingham Heart Study, National Heart, Lung, and Blood Institute, Framingham, MA.
James B MeigsMetabolism Program and Program in Medical and Population Genetics, Broad Institute, Cambridge, MA jmeigs@partners.org kolaczyk@bu.edu.
Eric D KolaczykProgram in Bioinformatics, Boston University, Boston, MA jmeigs@partners.org kolaczyk@bu.edu.
National Institutes of Health · USBoston University · USErasmus MC · NLBroad Institute · USUniversity of Exeter · GBNational Heart Lung and Blood Institute · USAzienda Sanitaria di Firenze · ITHarvard University · USUniversité de Sherbrooke · CA

Funding

Framingham Project/LevyZIAHL006001 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI LEVY, DANIEL · 2009 to 2025
$51.1M
Cardiovascular Genomics and Bioinformatics projectsZIAHL006170 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI JOHNSON, ANDREW · 2013 to 2025
$25.3M
Characterization of Normal Genomic VariabilityZIAAG000932 · NIA · NATIONAL INSTITUTE ON AGING · PI SINGLETON, ANDREW · 2009 to 2024
$11.3M
Common Genetic Variation and Quantitative Diabetes TraitsR01DK078616 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI MEIGS, JAMES B · 2008 to 2014
$5.0M
Statistical And Computational Methods For Gene Expression and Proteomic AnalysisZIACT000266 · CIT · CENTER FOR INFORMATION TECHNOLOGY · PI MUNSON, PETER J · 2009 to 2016
$4.2M
Rare Sequence Variation and Diabetes Quantitative TraitsU01DK078616 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI MEIGS, JAMES B · 2015 to 2019
$3.6M
HISPANIC SECONDARY STROKE PREVENTION INITIATIVER01MD009164 · NIMHD · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI CARRASQUILLO, OLVEEN · 2014 to 2018
$1.9M
Epidemiology of Precursors to Type 2 DiabetesK24DK080140 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI MEIGS, JAMES B · 2007 to 2016
$1.9M
EARLY MARKERS OF ALZHEIMER'S DISEASE IN LONGITUDINAL PARTICIPANTSZ01AG000185 · NIA · NATIONAL INSTITUTE ON AGING · PI RESNICK, SUSAN M · 1990 to 2008
$1.7M
EFFECT OF AGE AND GLYCEMIA ON TRANSCRIPTION FACTORSK01AG000947 · NIA · UNIVERSITY OF VERMONT &ST AGRIC COLLEGE · PI FUKAGAWA, NAOMI K · 2000 to 2004
$629k
THE FRAMINGHAM HEART STUDY-N01HC25195-268025195-268025195N01HC025195 · HC · TRUSTEES OF BOSTON UNIVERSITY · PI WOLF, PHILIP A · 2002 to 2006
–
Intramural NIH HHS Z01 AG000185Medical Research Council MR/J006777/1NHLBI NIH HHS N01 HC025195NIA NIH HHS K01 AG000947NIDDK NIH HHS K24 DK080140NIDDK NIH HHS R01 DK078616NIDDK NIH HHS U01 DK078616NIMHD NIH HHS R01 MD009164
6 · The paper itself

Abstract

Genome-wide association studies (GWAS) have successfully identified genetic loci associated with glycemic traits. However, characterizing the functional significance of these loci has proven challenging. We sought to gain insights into the regulation of fasting insulin and fasting glucose through the use of gene expression microarray data from peripheral blood samples of participants without diabetes in the Framingham Heart Study (FHS) (n = 5,056), the Rotterdam Study (RS) (n = 723), and the InCHIANTI Study (Invecchiare in Chianti) (n = 595). Using a false discovery rate q <0.05, we identified three transcripts associated with fasting glucose and 433 transcripts associated with fasting insulin levels after adjusting for age, sex, technical covariates, and complete blood cell counts. Among the findings, circulating IGF2BP2 transcript levels were positively associated with fasting insulin in both the FHS and RS. Using 1000 Genomes-imputed genotype data, we identified 47,587 cis-expression quantitative trait loci (eQTL) and 6,695 trans-eQTL associated with the 433 significant insulin-associated transcripts. Of note, we identified a trans-eQTL (rs592423), where the A allele was associated with higher IGF2BP2 levels and with fasting insulin in an independent genetic meta-analysis comprised of 50,823 individuals. We conclude that integration of genomic and transcriptomic data implicate circulating IGF2BP2 mRNA levels associated with glucose and insulin homeostasis.

Indexed as

AdultAgedBlood GlucoseFastingFemaleGenetic Predisposition to DiseaseGenome-Wide Association StudyGenotypeHumansInsulinMaleMiddle AgedQuantitative Trait LociRNA-Binding ProteinsRNA, MessengerTranscriptomeBlood GlucoseIGF2BP2 protein, humanInsulinRNA-Binding ProteinsRNA, Messenger

Identifiers

PMID27625022
PMCPMC5127245
OpenAlexW2519039612

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.