Evidence map›Paper›PMID 27623438›Full record

ArticleCarbohydrate research2016

New insights into Nod factor biosynthesis: Analyses of chitooligomers and lipo-chitooligomers of Rhizobium sp. IRBG74 mutants.

Véréna Poinsot, Matthew B Crook, Stéphanie Erdn, Fabienne Maillet, Adeline Bascaules, Jean-Michel Ané

Open access · hybridAbstract read
In one paragraph

Article in Carbohydrate research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
9.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Comparative genome analysis ofMicrobial genomics · 2023
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  3. Review
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  6. Review
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  8. Review
  9. The Ectomycorrhizal FungusThe Plant cell · 2019
    Article
  10. Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Véréna PoinsotLaboratoire des IMRCP, UMR 5623 Université Paul Sabatier, Toulouse, France.
Matthew B CrookDepartment of Bacteriology, University of Wisconsin-Madison, Madison, WI 53706, USA.
Stéphanie ErdnLaboratoire des Interactions Plantes-Microorganismes, UMR 441/2594 INRA-CNRS, B.P. 52627, F-31326 Castanet-Tolosan Cedex, France.
Fabienne MailletLaboratoire des Interactions Plantes-Microorganismes, UMR 441/2594 INRA-CNRS, B.P. 52627, F-31326 Castanet-Tolosan Cedex, France.
Adeline BascaulesLaboratoire des IMRCP, UMR 5623 Université Paul Sabatier, Toulouse, France.
Jean-Michel AnéDepartment of Bacteriology, University of Wisconsin-Madison, Madison, WI 53706, USA; Department of Agronomy, University of Wisconsin-Madison, Madison, WI 53706, USA. Electronic address: jeanmichel.ane@wisc.edu.
Laboratoire des Interactions Plantes Micro-Organismes · FRCentre National de la Recherche Scientifique · FRSoftmat - Chimie des colloïdes, polymères & assemblages complexes · FRUniversity of Wisconsin–Madison · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Soil-dwelling, nitrogen-fixing rhizobia signal their presence to legume hosts by secreting lipo-chitooligomers (LCOs) that are decorated with a variety of chemical substituents. It has long been assumed, but never empirically shown, that the LCO backbone is synthesized first by NodC, NodB, and NodA, followed by addition of one or more substituents by other Nod proteins. By analyzing a collection of in-frame deletion mutants of key nod genes in the bacterium Rhizobium sp. IRBG74 by mass spectrometry, we were able to shed light on the possible substitution order of LCO decorations, and we discovered that the prevailing view is probably erroneous. We found that most substituents could be transferred to a short chitin backbone prior to acylation by NodA, which is probably one of the last steps in LCO biosynthesis. The existence of substituted, short chitin oligomers offers new insights into symbiotic plant-microbe signaling.

Indexed as

AcylationBacterial ProteinsChitinChitosanLipopolysaccharidesMass SpectrometryMolecular StructureMutationOligosaccharidesRhizobiumBacterial ProteinsChitinChitosanLipopolysaccharidesoligochitosanOligosaccharidesAcylationArabinosylationCarbamoylationChitooligomersFucosylationLipo-chitooligomers

Identifiers

PMID27623438
PMCPMC5080398
OpenAlexW2487701854

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.