Evidence map›Paper›PMID 27623324›Full record

ArticleJournal of immunological methods2016

Superior isolation of antigen-specific brain infiltrating T cells using manual homogenization technique.

Luz M Cumba Garcia, April M Huseby Kelcher, Courtney S Malo, Aaron J Johnson

Abstract readComparative Study
In one paragraph

Article in Journal of immunological methods, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed, 1 pooled it
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 1 synthesis or guideline pooled it, 44 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Dissection of Neurotropic Theiler's Murine Encephalomyelitis Virus Induced Brain Atrophy in Single MHC Class I Mice of C57BL/6 Background.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2025
    Article
  6. Frontiers in immunology · 2025
    Article
  7. Article
  8. iScience · 2024
    Article
  9. Article
  10. bioRxiv : the preprint server for biology · 2024
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. TREM2 mediates MHCII-associated CD4bioRxiv : the preprint server for biology · 2023
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Conditional Silencing of H-2DJournal of immunology (Baltimore, Md. : 1950) · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Luz M Cumba GarciaImmunology Graduate Program, Mayo Clinic, Rochester, MN, United States.
April M Huseby KelcherImmunology Graduate Program, Mayo Clinic, Rochester, MN, United States.
Courtney S MaloImmunology Graduate Program, Mayo Clinic, Rochester, MN, United States.
Aaron J JohnsonDepartment of Immunology, Mayo Clinic, Rochester, MN, United States. Electronic address: Johnson.Aaron2@mayo.edu.
Mayo Clinic in Arizona · USWinnMed · US

Funding

TRAINING IN TRANSLATIONAL RESEARCH: BENCH TO BEDSIDER25GM055252 · NIGMS · MAYO CLINIC ROCHESTER · PI LUJAN, LUIS, MAHER, LOUIS JAMES · 1996 to 2022
$8.3M
Post-baccalaureate Training in Biomedical ResearchR25GM075148 · NIGMS · MAYO CLINIC ROCHESTER · PI LUJAN, LUIS, MAHER, LOUIS JAMES · 2006 to 2024
$6.1M
PHD TRAINING PROGRAM IN BASIC IMMUNOLOGYT32AI007425 · NIAID · MAYO CLINIC ROCHESTER · PI SHAPIRO, VIRGINIA SMITH · 1995 to 2020
$3.6M
Enhancing Glioma-Specific ImmunityR21CA186976 · NCI · MAYO CLINIC ROCHESTER · PI JOHNSON, AARON J · 2014 to 2015
$380k
NCI NIH HHS R21 CA186976NIAID NIH HHS T32 AI007425NIGMS NIH HHS R25 GM055252NIGMS NIH HHS R25 GM075148
6 · The paper itself

Abstract

Effective recovery of activated brain infiltrating lymphocytes is critical for investigations involving murine neurological disease models. To optimize lymphocyte recovery, we compared two isolation methods using brains harvested from seven-day Theiler's murine encephalomyelitis virus (TMEV) and TMEV-OVA infected mice. Brains were processed using either a manual dounce based approach or enzymatic digestion using type IV collagenase. The resulting cell suspensions from these two techniques were transferred to a percoll gradient, centrifuged, and lymphocytes were recovered. Flow cytometric analysis of CD45

Indexed as

Lymphocyte ActivationAnimalsAntigensAntigens, CD19B-LymphocytesBrainCapsid ProteinsCardiovirus InfectionsCD8-Positive T-LymphocytesCell SeparationCell SurvivalCentrifugation, Density GradientCollagenasesCollagen Type IVDisease Models, AnimalEpitopesAntigensAntigens, CD19Capsid ProteinsCD19 antigen, mouseCd44 protein, mouseCollagenasesCollagen Type IVEpitopesHyaluronan ReceptorsOvalbuminPercollPovidoneSelectinsSilicon DioxideVP2 protein, TheilovirusCD8 T cellCNS viral infectionLymphocyte isolationNeuroinflammationOptimized recoveryTheiler's murine encephalomyelitis virus

Identifiers

PMID27623324
PMCPMC5310589
OpenAlexW2520042884

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.