Evidence map›Paper›PMID 27623071›Full record

ArticleOncotarget2016

SP110 and PMP22 polymorphisms are associated with tuberculosis risk in a Chinese-Tibetan population.

Guoxia Ren, Jiangtao You, Xianfeng Gong, Xiucheng Zhang, Lin Zhao, Xianglan Wei, Tianbo Jin, Mingwei Chen

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Local adaptation ofProceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  3. Article
  4. Article
  5. Association betweenInternational journal of clinical and experimental pathology · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Guoxia RenDepartment of Respiratory and Critical Care Medicine, The First Affiliated Hospital of School of Medicine of Xi'an Jiaotong University, Xi'an 710061, People's Republic of China.
Jiangtao YouDepartment of Thoracic Surgery, First Affiliated Hospital of Xi'an Jiaotong University, Xi'an 710061, People's Republic of China.
Xianfeng GongDepartment of Intergrated Traditional Chinese and Western Medicine, Xi'an Chest Hospital, Xi'an 710061, People's Republic of China.
Xiucheng ZhangDepartment of Intergrated Traditional Chinese and Western Medicine, Xi'an Chest Hospital, Xi'an 710061, People's Republic of China.
Lin ZhaoDepartment of Intergrated Traditional Chinese and Western Medicine, Xi'an Chest Hospital, Xi'an 710061, People's Republic of China.
Xianglan WeiDepartment of Intergrated Traditional Chinese and Western Medicine, Xi'an Chest Hospital, Xi'an 710061, People's Republic of China.
Tianbo JinSchool of Life Sciences, Northwest University, Xi'an 710069, People's Republic of China.
Mingwei ChenDepartment of Respiratory and Critical Care Medicine, The First Affiliated Hospital of School of Medicine of Xi'an Jiaotong University, Xi'an 710061, People's Republic of China.
Xi'an Chest Hospital · CNFirst Affiliated Hospital of Xi'an Jiaotong University · CNNorthwest University · CNXi'an Jiaotong University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Susceptibility to tuberculosis (TB) is partially dependent on host genetic variability. SP110 and PMP22 are candidate genes identified in this study as associated with human susceptibility to TB. Here we performed an association analysis in a case-control study of a Tibetan population (217 cases and 383 controls). Using bioinformatics methods, we identified two SNPs in SP110 that may decrease susceptibility to TB (rs4327230, p<0.001, OR: 0.37, 95%CI: 0.25-0.55; rs2114591, p<0.001, OR: 0.59, 95%CI: 0.45-0.78), whereas one SNP in PMP22 appeared to increase TB risk (rs13422, p=0.003, OR: 1.45, 95%CI: 1.14-1.84). SNPs rs4327230 and rs2114591 remained significant after Bonferroni correction (p<0.00178). We found that the "GC" haplotype in SP110 was protective against TB, with a 64% reduction in disease risk. "CA" and "CG" in PMP22 were also associated with a protective effect. Our study indicates there is an association between specific gene polymorphisms and TB risk in a Tibetan population, and may help to identify those TB-affected individuals most susceptible to disease.

Indexed as

Polymorphism, Single NucleotideAdultAsian PeopleBiomarkers, TumorCase-Control StudiesChinaFemaleFollow-Up StudiesGenetic Association StudiesGenetic Predisposition to DiseaseGenotypeHumansMaleMinor Histocompatibility AntigensMycobacterium tuberculosisMyelin ProteinsBiomarkers, TumorMinor Histocompatibility AntigensMyelin ProteinsNuclear ProteinsPMP22 protein, humanSp110 protein, humanPMP22single nucleotide polymorphism (SNP)SP110Tibettuberculosis (TB)

Identifiers

PMID27623071
PMCPMC5323218
OpenAlexW2523393607

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.