Evidence map›Paper›PMID 27621477›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

A C-terminal amphipathic helix is necessary for the in vivo tubule-shaping function of a plant reticulon.

Emily Breeze, Natasha Dzimitrowicz, Verena Kriechbaumer, Rhiannon Brooks, Stanley W Botchway, Jacob P Brady, Chris Hawes, Ann M Dixon, Jason R Schnell, Mark D Fricker and 1 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed.

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  8. Quantitation of ER Morphology and Dynamics.Methods in molecular biology (Clifton, N.J.) · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Emily BreezeSchool of Life Sciences, University of Warwick, Coventry CV4 7AL, United Kingdom;
Natasha DzimitrowiczSchool of Life Sciences, University of Warwick, Coventry CV4 7AL, United Kingdom;
Verena KriechbaumerDepartment of Biological and Medical Sciences, Oxford Brookes University, Oxford OX3 0BP, United Kingdom;
Rhiannon BrooksDepartment of Chemistry, University of Warwick, Coventry CV4 7AL, United Kingdom;
Stanley W BotchwayCentral Laser Facility, Science and Technology Facilities Council, Rutherford Appleton Laboratory, Research Complex at Harwell, Didcot OX11 0QX, United Kingdom;
Jacob P BradyDepartment of Biochemistry, University of Oxford, Oxford OX1 3QU, United Kingdom;
Chris HawesDepartment of Biological and Medical Sciences, Oxford Brookes University, Oxford OX3 0BP, United Kingdom;
Ann M DixonDepartment of Chemistry, University of Warwick, Coventry CV4 7AL, United Kingdom;
Jason R SchnellDepartment of Biochemistry, University of Oxford, Oxford OX1 3QU, United Kingdom;
Mark D FrickerDepartment of Plant Sciences, University of Oxford, Oxford OX1 3RB, United Kingdom.
Lorenzo FrigerioSchool of Life Sciences, University of Warwick, Coventry CV4 7AL, United Kingdom; l.frigerio@warwick.ac.uk.

Funding

Medical Research Council MR/M019152/1
6 · The paper itself

Abstract

Reticulons (RTNs) are a class of endoplasmic reticulum (ER) membrane proteins that are capable of maintaining high membrane curvature, thus helping shape the ER membrane into tubules. The mechanism of action of RTNs is hypothesized to be a combination of wedging, resulting from the transmembrane topology of their conserved reticulon homology domain, and scaffolding, arising from the ability of RTNs to form low-mobility homo-oligomers within the membrane. We studied the plant RTN isoform RTN13, which has previously been shown to locate to ER tubules and the edges of ER cisternae and to induce constrictions in ER tubules when overexpressed, and identified a region in the C terminus containing a putative amphipathic helix (APH). Here we show that deletion of this region or disruption of the hydrophobic face of the predicted helix abolishes the ability of RTN13 to induce constrictions of ER tubules in vivo. These mutants, however, still retain their ability to interact and form low-mobility oligomers in the ER membrane. Hence, our evidence indicates that the conserved APH is a key structural feature for RTN13 function in vivo, and we propose that RTN, like other membrane morphogens, rely on APHs for their function.

Indexed as

Amino Acid SequenceArabidopsisArabidopsis ProteinsConserved SequenceEndoplasmic ReticulumFluorescence Resonance Energy TransferHydrophobic and Hydrophilic InteractionsIntracellular MembranesMutationNicotianaPlant EpidermisProtein Structure, SecondarySequence DeletionStructure-Activity RelationshipArabidopsis Proteinsamphipathic helixendoplasmic reticulummembrane curvatureplantreticulon

Identifiers

PMID27621477
PMCPMC5047209

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.