Evidence map›Paper›PMID 27621284›Full record

ArticleEMBO reports2016

Xanthomonas campestris attenuates virulence by sensing light through a bacteriophytochrome photoreceptor.

Hernán R Bonomi, Laila Toum, Gabriela Sycz, Rodrigo Sieira, Andrés M Toscani, Gustavo E Gudesblat, Federico C Leskow, Fernando A Goldbaum, Adrián A Vojnov, Florencia Malamud

Open access · bronzeAbstract read
In one paragraph

Article in EMBO reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
13.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 61 citations in OpenAlex.

  1. Mining Genetically Encoded Biosensors from Filamentous Fungi.Journal of fungi (Basel, Switzerland) · 2026
    Review
  2. Article
  3. Xanthomonas campestris pv. campestris regulates virulence mechanisms by sensing blue light.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2025
    Article
  4. Review
  5. Article
  6. Light cues induce protective anticipation of environmental water loss in terrestrial bacteria.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  7. A novel BLUF photoreceptor modulates the Xanthomonas citri subsp. citri-host plant interaction.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2023
    Article
  8. Review
  9. Red and Blue Light Differently InfluenceInternational journal of molecular sciences · 2022
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. A light life together: photosensing in the plant microbiota.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2021
    Review
  15. Article
  16. Phytochromes inFrontiers in plant science · 2021
    Review
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Hernán R BonomiFundación Instituto Leloir - IIBBA CONICET, Buenos Aires, Argentina hbonomi@leloir.org.ar avojnov@fundacioncassara.org.ar fmalamud@iibintech.com.ar.ORCID 0000-0002-1550-6181
Laila ToumInstituto de Ciencia y Tecnología Dr. Cesar Milstein, Fundación Pablo Cassará, CONICET, Buenos Aires, Argentina.
Gabriela SyczFundación Instituto Leloir - IIBBA CONICET, Buenos Aires, Argentina.
Rodrigo SieiraFundación Instituto Leloir - IIBBA CONICET, Buenos Aires, Argentina.
Andrés M ToscaniDepartamento de Química Biológica, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Buenos Aires, Argentina.
Gustavo E GudesblatInstituto de Ciencia y Tecnología Dr. Cesar Milstein, Fundación Pablo Cassará, CONICET, Buenos Aires, Argentina.
Federico C LeskowDepartamento de Química Biológica, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Buenos Aires, Argentina.
Fernando A GoldbaumFundación Instituto Leloir - IIBBA CONICET, Buenos Aires, Argentina.
Adrián A VojnovInstituto de Ciencia y Tecnología Dr. Cesar Milstein, Fundación Pablo Cassará, CONICET, Buenos Aires, Argentina hbonomi@leloir.org.ar avojnov@fundacioncassara.org.ar fmalamud@iibintech.com.ar.
Florencia MalamudInstituto de Ciencia y Tecnología Dr. Cesar Milstein, Fundación Pablo Cassará, CONICET, Buenos Aires, Argentina hbonomi@leloir.org.ar avojnov@fundacioncassara.org.ar fmalamud@iibintech.com.ar.
Consejo Nacional de Investigaciones Científicas y Técnicas · ARUniversidad de Buenos Aires · AR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Phytochromes constitute a major photoreceptor family found in plants, algae, fungi, and prokaryotes, including pathogens. Here, we report that Xanthomonas campestris pv. campestris (Xcc), the causal agent of black rot disease which affects cruciferous crops worldwide, codes for a functional bacteriophytochrome (XccBphP). XccBphP possesses an N-terminal PAS2-GAF-PHY photosensory domain triad and a C-terminal PAS9 domain as its output module. Our results show that illumination of Xcc, prior to plant infection, attenuates its virulence in an XccBphP-dependent manner. Moreover, in response to light, XccBphP downregulates xanthan exopolysaccharide production and biofilm formation, two known Xcc virulence factors. Furthermore, the XccbphP null mutant shows enhanced virulence, similar to that of dark-adapted Xcc cultures. Stomatal aperture regulation and callose deposition, both well-established plant defense mechanisms against bacterial pathogens, are overridden by the XccbphP strain. Additionally, an RNA-Seq analysis reveals that far-red light or XccBphP overexpression produces genomewide transcriptional changes, including the inhibition of several Xcc virulence systems. Our findings indicate that Xcc senses light through XccBphP, eliciting bacterial virulence attenuation via downregulation of bacterial virulence factors. The capacity of XccBphP to respond to light both in vitro and in vivo was abolished by a mutation on the conserved Cys13 residue. These results provide evidence for a novel bacteriophytochrome function affecting an infectious process.

Indexed as

Bacterial ProteinsBiofilmsCrops, AgriculturalGene Expression Regulation, BacterialHigh-Throughput Nucleotide SequencingLightMutationPhytochromePlant DiseasesPolysaccharides, BacterialVirulence FactorsXanthomonas campestrisBacterial ProteinsPhytochromePolysaccharides, BacterialVirulence Factorsxanthan gumbathy‐type phytochromeinfectionplant defensestranscriptional regulationvirulence factors

Identifiers

PMID27621284
PMCPMC5090697
OpenAlexW2518874250

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.