Evidence map›Paper›PMID 27620673›Full record

ArticleScientific reports2016

The multifaceted RisA regulon of Bordetella pertussis.

Loïc Coutte, Ludovic Huot, Rudy Antoine, Stephanie Slupek, Tod J Merkel, Qing Chen, Scott Stibitz, David Hot, Camille Locht

Abstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Avirulent phenotype promotesEmerging microbes & infections · 2023
    Article
  7. Deep longitudinal multi-omics analysis ofFrontiers in microbiology · 2023
    Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Evolution and Conservation ofFrontiers in microbiology · 2020
    Review
  19. Article
  20. Analysis of themSphere · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Loïc CoutteInstitut Pasteur de Lille, Center for Infection and Immunity of Lille, Lille, France.
Ludovic HuotInstitut Pasteur de Lille, Center for Infection and Immunity of Lille, Lille, France.
Rudy AntoineInstitut Pasteur de Lille, Center for Infection and Immunity of Lille, Lille, France.
Stephanie SlupekInstitut Pasteur de Lille, Center for Infection and Immunity of Lille, Lille, France.
Tod J MerkelDivison of Bacterial, Parasitic and Allergenic Products, Center for Biologics Evaluation and Research, FDA, Silver Spring, MD, USA.
Qing ChenDivison of Bacterial, Parasitic and Allergenic Products, Center for Biologics Evaluation and Research, FDA, Silver Spring, MD, USA.
Scott StibitzDivison of Bacterial, Parasitic and Allergenic Products, Center for Biologics Evaluation and Research, FDA, Silver Spring, MD, USA.
David HotInstitut Pasteur de Lille, Center for Infection and Immunity of Lille, Lille, France.
Camille LochtInstitut Pasteur de Lille, Center for Infection and Immunity of Lille, Lille, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The whooping cough agent Bordetella pertussis regulates the production of its virulence factors by the BvgA/S system. Phosphorylated BvgA activates the virulence-activated genes (vags) and represses the expression of the virulence-repressed genes (vrgs) via the activation of the bvgR gene. In modulating conditions, with MgSO4, the BvgA/S system is inactive, and the vrgs are expressed. Here, we show that the expression of almost all vrgs depends on RisA, another transcriptional regulator. We also show that some vags are surprisingly no longer modulated by MgSO4 in the risA(-) background. RisA also regulates the expression of other genes, including chemotaxis and flagellar operons, iron-regulated genes, and genes of unknown function, which may or may not be controlled by BvgA/S. We identified RisK as the likely cognate RisA kinase and found that it is important for expression of most, but not all RisA-regulated genes. This was confirmed using the phosphoablative RisAD(60)N and the phosphomimetic RisAD(60)E analogues. Thus the RisA regulon adds a new layer of complexity to B. pertussis virulence gene regulation.

Indexed as

Gene Expression Regulation, BacterialRegulonBacterial ProteinsBordetella pertussisGlutamic AcidMultigene FamilyOligonucleotide Array Sequence AnalysisOperonPhosphorylationPromoter Regions, GeneticReceptors, Cell SurfaceTranscriptional ActivationTranscription FactorsTranscription, GeneticTranscriptomeVirulenceBacterial ProteinsGlutamic AcidReceptors, Cell SurfaceRisA protein, BordetellaTranscription Factors

Identifiers

PMID27620673
PMCPMC5020355

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.