Evidence map›Paper›PMID 27618862›Full record

ArticleMicrobial cell factories2016

Systems metabolic engineering of Corynebacterium glutamicum for the production of the carbon-5 platform chemicals 5-aminovalerate and glutarate.

Christina Maria Rohles, Gideon Gießelmann, Michael Kohlstedt, Christoph Wittmann, Judith Becker

Abstract read
In one paragraph

Article in Microbial cell factories, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed.

  1. Article
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  10. GC/MS-basedMicrobial cell factories · 2022
    Article
  11. Metabolic Engineering ofMicroorganisms · 2022
    Article
  12. Aerobic Utilization of Methanol for Microbial Growth and Production.Advances in biochemical engineering/biotechnology · 2022
    Article
  13. Review
  14. Article
  15. Review
  16. Article
  17. Article
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  19. Glutaric acid production by systems metabolic engineering of an l-lysine-overproducingProceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Christina Maria RohlesInstitute of Systems Biotechnology, Saarland University, Saarbrücken, Germany.
Gideon GießelmannInstitute of Systems Biotechnology, Saarland University, Saarbrücken, Germany.
Michael KohlstedtInstitute of Systems Biotechnology, Saarland University, Saarbrücken, Germany.
Christoph WittmannInstitute of Systems Biotechnology, Saarland University, Saarbrücken, Germany.
Judith BeckerInstitute of Systems Biotechnology, Saarland University, Saarbrücken, Germany. judith.becker@uni-saarland.de.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe steadily growing world population and our ever luxurious life style, along with the simultaneously decreasing fossil resources has confronted modern society with the issue and need of finding renewable routes to accommodate for our demands. Shifting the production pipeline from raw oil to biomass requires efficient processes for numerous platform chemicals being produced with high yield, high titer and high productivity.

resultsIn the present work, we established a de novo bio-based production process for the two carbon-5 platform chemicals 5-aminovalerate and glutarate on basis of the lysine-hyperproducing strain Corynebacterium glutamicum LYS-12. Upon heterologous implementation of the Pseudomonas putida genes davA, encoding 5-aminovaleramidase and davB, encoding lysine monooxygenase, 5-aminovalerate production was established. Related to the presence of endogenous genes coding for 5-aminovalerate transaminase (gabT) and glutarate semialdehyde dehydrogenase, 5-aminovalerate was partially converted to glutarate. Moreover, residual L-lysine was secreted as by-product. The issue of by-product formation was then addressed by deletion of the lysE gene, encoding the L-lysine exporter. Additionally, a putative gabT gene was deleted to enhance 5-aminovalerate production. To fully exploit the performance of the optimized strain, fed-batch fermentation was carried out producing 28 g L(-1) 5-aminovalerate with a maximal space-time yield of 0.9 g L(-1) h(-1).

conclusionsThe present study describes the construction of a recombinant microbial cell factory for the production of carbon-5 platform chemicals. Beyond a basic proof-of-concept, we were able to specifically increase the production flux of 5-aminovalerate thereby generating a strain with excellent production performance. Additional improvement can be expected by removal of remaining by-product formation and bottlenecks, associated to the terminal pathway, to generate a strain being applicable as centerpiece for a bio-based production of 5-aminovalerate.

Indexed as

AmidohydrolasesAmino Acids, NeutralAmino Acid Transport Systems, BasicBacterial ProteinsCarbonCorynebacterium glutamicumFermentationGlutaratesLysineMetabolic EngineeringMixed Function OxygenasesPseudomonas putidaSynthetic BiologySystems Biology5-aminovaleramidase5-aminovaleric acidAmidohydrolasesAmino Acids, NeutralAmino Acid Transport Systems, BasicBacterial ProteinsCarbonGlutaratesLysE protein, Corynebacterium glutamicumLysinelysine monooxygenaseMixed Function OxygenasesBio-economyBio-nylonHeterologous productionLysine monooxygenaseMetabolic engineeringPlatform chemicalSynthetic biology

Identifiers

PMID27618862
PMCPMC5020477

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.